Re: [Numpy-discussion] Removal of Deprecated Keywords/functionality

2015-06-21 Thread Ralf Gommers
On Mon, Jun 22, 2015 at 12:48 AM, Honi Sanders wrote: > OK. So I am in the midst of a pull request adding a “maxlag” mode to > correlate ( > https://github.com/numpy/numpy/compare/master...bringingheavendown:maxlag). > Am I to understand that I no longer need to preserve the old_behavior > functi

Re: [Numpy-discussion] Removal of Deprecated Keywords/functionality

2015-06-21 Thread Honi Sanders
OK. So I am in the midst of a pull request adding a “maxlag” mode to correlate (https://github.com/numpy/numpy/compare/master...bringingheavendown:maxlag). Am I to understand that I no longer need to preserve the old_behavior functionality? Is it possible that we could address my pull request

Re: [Numpy-discussion] How to limit cross correlation window width in Numpy?

2015-06-21 Thread Honi Sanders
Did you check out my implementation? I was able to modify the Numpy correlate function just fine. https://github.com/numpy/numpy/compare/master...bringingheavendown:maxlag > On Jun 21, 2015, at 1:53 PM, Mansour Moufid wrote: > > I just realized that NumPy uses the time domain algorithm for c

Re: [Numpy-discussion] Clarification sought on Scipy Numpy version requirements.

2015-06-21 Thread Ralf Gommers
On Sun, Jun 21, 2015 at 8:13 PM, Charles R Harris wrote: > > > On Sun, Jun 21, 2015 at 11:49 AM, Charles R Harris < > charlesr.har...@gmail.com> wrote: > >> >> Looks like Scipy 0.13.3 is OK against master apart from a bunch of >> runtime errors due to deprecation warnings, >> > Note that you only

Re: [Numpy-discussion] Clarification sought on Scipy Numpy version requirements.

2015-06-21 Thread Ralf Gommers
On Sun, Jun 21, 2015 at 7:49 PM, Charles R Harris wrote: > > > On Sun, Jun 21, 2015 at 9:57 AM, Ralf Gommers > wrote: > >> >> That's code that was only introduced for 0.16.x; a ``git clean -xdf`` >> should fix this for you. >> >> Next obstacle: I think it'll fail with Cython 0.22, you'll need a

Re: [Numpy-discussion] Clarification sought on Scipy Numpy version requirements.

2015-06-21 Thread Charles R Harris
On Sun, Jun 21, 2015 at 11:49 AM, Charles R Harris < charlesr.har...@gmail.com> wrote: > > > On Sun, Jun 21, 2015 at 9:57 AM, Ralf Gommers > wrote: > >> >> >> On Sun, Jun 21, 2015 at 5:45 PM, Charles R Harris < >> charlesr.har...@gmail.com> wrote: >> >>> >>> >>> On Sun, Jun 21, 2015 at 9:31 AM, R

Re: [Numpy-discussion] How to limit cross correlation window width in Numpy?

2015-06-21 Thread Mansour Moufid
I just realized that NumPy uses the time domain algorithm for correlation. So it would be much easier to modify the correlation functions in SciPy than in NumPy. ___ NumPy-Discussion mailing list NumPy-Discussion@scipy.org http://mail.scipy.org/mailman/li

Re: [Numpy-discussion] Clarification sought on Scipy Numpy version requirements.

2015-06-21 Thread Charles R Harris
On Sun, Jun 21, 2015 at 9:57 AM, Ralf Gommers wrote: > > > On Sun, Jun 21, 2015 at 5:45 PM, Charles R Harris < > charlesr.har...@gmail.com> wrote: > >> >> >> On Sun, Jun 21, 2015 at 9:31 AM, Ralf Gommers >> wrote: >> >>> >>> >>> On Sun, Jun 21, 2015 at 5:13 PM, Charles R Harris < >>> charlesr.ha

Re: [Numpy-discussion] Clarification sought on Scipy Numpy version requirements.

2015-06-21 Thread Sturla Molden
Charles R Harris wrote: > Ralf, I cannot compile Scipy 0.13.3 on my system, it seems to fail her > _decomp_update.pyx:60:0: 'cython_blas.pxd' not found Do you have a clean SciPy 0.13.3 source tree? cython_blas.pxd is introduced in 0.16, and should be in 0.13 at all. Sturla _

Re: [Numpy-discussion] Clarification sought on Scipy Numpy version requirements.

2015-06-21 Thread Ralf Gommers
On Sun, Jun 21, 2015 at 5:45 PM, Charles R Harris wrote: > > > On Sun, Jun 21, 2015 at 9:31 AM, Ralf Gommers > wrote: > >> >> >> On Sun, Jun 21, 2015 at 5:13 PM, Charles R Harris < >> charlesr.har...@gmail.com> wrote: >> >>> >>> >>> >>> On Sun, Jun 21, 2015 at 7:14 AM, Ralf Gommers >>> wrote: >

Re: [Numpy-discussion] Clarification sought on Scipy Numpy version requirements.

2015-06-21 Thread Charles R Harris
On Sun, Jun 21, 2015 at 9:31 AM, Ralf Gommers wrote: > > > On Sun, Jun 21, 2015 at 5:13 PM, Charles R Harris < > charlesr.har...@gmail.com> wrote: > >> >> >> >> On Sun, Jun 21, 2015 at 7:14 AM, Ralf Gommers >> wrote: >> >>> >>> >>> On Fri, Jun 19, 2015 at 11:52 PM, Charles R Harris < >>> charles

Re: [Numpy-discussion] Clarification sought on Scipy Numpy version requirements.

2015-06-21 Thread Ralf Gommers
On Sun, Jun 21, 2015 at 5:13 PM, Charles R Harris wrote: > > > > On Sun, Jun 21, 2015 at 7:14 AM, Ralf Gommers > wrote: > >> >> >> On Fri, Jun 19, 2015 at 11:52 PM, Charles R Harris < >> charlesr.har...@gmail.com> wrote: >> >>> >>> >>> On Fri, Jun 19, 2015 at 3:05 PM, Sturla Molden >>> wrote: >

Re: [Numpy-discussion] Clarification sought on Scipy Numpy version requirements.

2015-06-21 Thread Charles R Harris
On Sun, Jun 21, 2015 at 7:14 AM, Ralf Gommers wrote: > > > On Fri, Jun 19, 2015 at 11:52 PM, Charles R Harris < > charlesr.har...@gmail.com> wrote: > >> >> >> On Fri, Jun 19, 2015 at 3:05 PM, Sturla Molden >> wrote: >> >>> Charles R Harris wrote: >>> >>> > I'm looking to change some numpy depre

Re: [Numpy-discussion] Clarification sought on Scipy Numpy version requirements.

2015-06-21 Thread Ralf Gommers
On Fri, Jun 19, 2015 at 10:08 PM, Charles R Harris < charlesr.har...@gmail.com> wrote: > Hi All, > > I'm looking to change some numpy deprecations into errors as well as > remove some deprecated functions. The problem I see is that > SciPy claims to support Numpy >= 1.5 and Numpy 1.5 is really, re

Re: [Numpy-discussion] Clarification sought on Scipy Numpy version requirements.

2015-06-21 Thread Ralf Gommers
On Fri, Jun 19, 2015 at 11:52 PM, Charles R Harris < charlesr.har...@gmail.com> wrote: > > > On Fri, Jun 19, 2015 at 3:05 PM, Sturla Molden > wrote: > >> Charles R Harris wrote: >> >> > I'm looking to change some numpy deprecations into errors as well as >> remove >> > some deprecated functions.

Re: [Numpy-discussion] Removal of Deprecated Keywords/functionality

2015-06-21 Thread Daniele Nicolodi
On 21/06/15 01:07, Charles R Harris wrote: > > > On Sat, Jun 20, 2015 at 3:32 PM, Nathaniel Smith > wrote: > > On Jun 20, 2015 1:43 PM, "Charles R Harris" > mailto:charlesr.har...@gmail.com>> wrote: > > > > Hi All, > > > > There are three long ago

Re: [Numpy-discussion] Removal of Deprecated Keywords/functionality

2015-06-21 Thread Sebastian
-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Hi, > Note that the "skiprows" keyword is still used in loadtxt. It should probably > be deprecated there for consistency, but it is possible that some use it as a positional argument. skiprows is t the only argument of loadtxt that allows skippi