Re: [OpenBabel-Devel] Patches in tracker and 2.3.1

2011-09-14 Thread Geoffrey Hutchison
On Sep 14, 2011, at 11:21 AM, My Th wrote: >> For 2.3, I'd prefer the latter, but I'm open to the patches for future >> releases. > > Are the patches fine as they are for future releases? I haven't had a chance to review them completely. I'll let you know. > What would be the desired behavior

Re: [OpenBabel-Devel] Patches in tracker and 2.3.1

2011-09-14 Thread My Th
Thanks for the comments! > > 1) Patch #3311952 adding GRO format > > http://sourceforge.net/tracker/?func=detail&aid=3311952&group_id=40728&atid=428742 > > Great. Can we have an example file or two? I uploaded two example files. One is a short trajectory file, the second is a molecule in periodi

Re: [OpenBabel-Devel] CDash Tests and 2.3.1

2011-09-14 Thread Noel O'Boyle
On 14 September 2011 13:52, Geoffrey Hutchison wrote: >> On second thoughts, I think I'll wait until after the release to sort >> this out. > > So I should revert (or not apply) the parsmarts patch for 2.3.1, correct? Exactly. I think you've already reverted it on the trunk, so you could just mer

Re: [OpenBabel-Devel] CDash Tests and 2.3.1

2011-09-14 Thread Geoffrey Hutchison
> On second thoughts, I think I'll wait until after the release to sort > this out. So I should revert (or not apply) the parsmarts patch for 2.3.1, correct? > I'd prefer to see the current code go out the door. Great, I'll start to merge patches into the 2-3-x branch and we can give some time

Re: [OpenBabel-Devel] CDash Tests and 2.3.1

2011-09-14 Thread Noel O'Boyle
On 13 September 2011 19:51, Geoffrey Hutchison wrote: >> The patch is correct. It just exposes some bugs in the SMARTS matcher >> for stereochemistry. I'm 50% through resolving it. Can you hang on >> another few days and I'll have it sorted? > > OK, sounds good. > > -Geoff On second thoughts, I t