Re: [OpenBabel-Devel] Sub-strucure search

2011-09-17 Thread Chris Morley
On 16/09/2011 22:34, andi wrote: I'm trying to see if a one fragment is a sub-structure of a molecule and am using *OBIsomorphismMapper*, however when I start modifying the molecule (deleting atoms etc..), i start getting strange results, including some segmentation faults. First I want to

Re: [OpenBabel-Devel] Useful conversion features

2011-09-17 Thread Noel O'Boyle
Sounds like you are on top of this. :-) While on the subject of things that must wait until OB 2.4 (I think), I was talking to Andrew Dalke recently and he mentioned it would be useful to have the fingerprint formats report the number of bits. This is important for certain types of similarity