I doubt anyone will be able to shed light on this, but... OpenBabel is
randomly hanging in the C++ deallocator. See the stack trace below.
I've run into weird problems like this before, and it was related to the
fact that I'm linking a C++ library (OpenBabel) into a C program (the
Postgres databa
Chris,
I'm finally picking up the thread with the reactions.
A quick question for you - my first attempt to follow through on your
example got me a seg fault - OBReaction does not seem to have a
destructor, so when react goes out of scope my program crashes.
I was able to work around this by allo
On May 1, 2012, at 10:04 PM, Geoff Hutchison wrote:
>
> What version of SWIG are you using?
>
I have SWIG Version 2.0.6
Compiled with /usr/bin/clang++ [i386-apple-darwin11.4.0]
Configured options: +pcre
On May 2, 2012, at 5:27 AM, Noel O'Boyle wrote:
> Are you comparing 32-bit builds?
>
No,
On Thu, May 3, 2012 at 10:31 AM, Geoff Hutchison
wrote:
>> So from Avogadro, we'll need to know whether or not to expect these features
>> to be available. Does OpenBabel export anything that will let us know if it
>> was built with Eigen? Or is it just time to make Eigen a hard dependency for
> So from Avogadro, we'll need to know whether or not to expect these features
> to be available. Does OpenBabel export anything that will let us know if it
> was built with Eigen? Or is it just time to make Eigen a hard dependency for
> OB? Eigen is hardly difficult to find these days, are ther
Ah, that's the problem.
So from Avogadro, we'll need to know whether or not to expect these
features to be available. Does OpenBabel export anything that will let us
know if it was built with Eigen? Or is it just time to make Eigen a hard
dependency for OB? Eigen is hardly difficult to find these
If OB is not built with Eigen these classes are missing.
On 3 May 2012 11:42, David Lonie wrote:
> I'm having an issue compiling the latest avogadro, and it looks like an
> issue with the new OBConformerSearch class. Can anyone reproduce? This is
> with a fresh checkout/build of both avogadro an
I'm having an issue compiling the latest avogadro, and it looks like an
issue with the new OBConformerSearch class. Can anyone reproduce? This is
with a fresh checkout/build of both avogadro and openbabel.
Linking CXX shared module ../../../lib/forcefieldextension.so
CMakeFiles/forcefieldextension
