Re: [OpenBabel-Devel] Perceive bonds with obabel

2013-02-13 Thread Marcus D. Hanwell
On Tue, Feb 12, 2013 at 12:06 PM, David Lonie david.lo...@kitware.com wrote: On Tue, Feb 12, 2013 at 12:00 PM, Noel O'Boyle baoille...@gmail.com wrote: Try the xyz format. That was our next guess, just wanted to make sure that I wasn't overlooking anything more straightforward. That is a

[OpenBabel-Devel] openbabel substurcture

2013-02-13 Thread mounika
In Substructure search i am using the following code import org.openbabel.OBMol; import org.openbabel. OBConversion; import org.openbabel.OBSmartsPattern; import java.util.*; public class test1 { public static void main(String args[]) { System.loadLibrary(openbabel_java); String

Re: [OpenBabel-Devel] openbabel substurcture

2013-02-13 Thread Noel O'Boyle
If using Eclipse, you can ask it to add the necessary imports. (If not using Eclipse, good luck writing Java :-) In this case, I'm guessing something like import org.openbabel.vectorvint or so...? - Noel On 12 February 2013 09:09, mounika mouni07...@gmail.com wrote: In Substructure search i am