Re: [OpenBabel-Devel] Bug in obabel on Mac when input and output formats match

2013-04-09 Thread Noel O'Boyle
Does it improve if you leave out the --log and if you use -O myfile.cml instead? - Noel On 8 April 2013 20:28, Marcus D. Hanwell marcus.hanw...@kitware.com wrote: Hi, We are using obabel to perform geometry optimizations etc on the command line, and we are hitting a bug that seems to only

Re: [OpenBabel-Devel] Bug in obabel on Mac when input and output formats match

2013-04-09 Thread Noel O'Boyle
-O ethanol.cml On 9 April 2013 00:20, David van der Spoel sp...@xray.bmc.uu.se wrote: On 2013-04-09 03:28, Marcus D. Hanwell wrote: Hi, We are using obabel to perform geometry optimizations etc on the command line, and we are hitting a bug that seems to only present itself on the Mac. If