Re: [OpenBabel-Devel] InChI from obabel differs from direct C++ code

2013-06-18 Thread Noel O'Boyle
I understand where the expected output is coming from, but where's the 'wrong' output coming from? You have pmol_conv_ich-SetInAndOutFormats(inchi, inchi); This does mean you are reading one of those InChIs and roundtripping it? Or are you reading the SMILES somewhere else and using this

Re: [OpenBabel-Devel] InChI from obabel differs from direct C++ code

2013-06-18 Thread Noel O'Boyle
This is for marking the molecule as 2D (i.e. having 2D coordinates associated with it). After reading a SMILES it should be marked as 0D. - Noel On 18 June 2013 19:48, Craig James cja...@emolecules.com wrote: (forgot to cc list the first time...) On Tue, Jun 18, 2013 at 10:34 AM, Noel