Re: [OpenBabel-Devel] Thermochemistry

2015-02-05 Thread David van der Spoel
On 2015-02-05 15:47, Noel O'Boyle wrote: > Could you use "--" for options where the keyword is more than one > letter, and "-" only for those with a single letter? > Sure! Any suggestions for the important question: >> >> However it would be extremely helpful if someone can give me a pointer >> as

Re: [OpenBabel-Devel] Thermochemistry

2015-02-05 Thread Noel O'Boyle
Could you use "--" for options where the keyword is more than one letter, and "-" only for those with a single letter? - Noel On 5 February 2015 at 14:34, David van der Spoel wrote: > I now made a program obthermo that works like this: > > % obthermo methane-g3-298.log > obthermo - extract therm

Re: [OpenBabel-Devel] Thermochemistry

2015-02-05 Thread David van der Spoel
I now made a program obthermo that works like this: % obthermo methane-g3-298.log obthermo - extract thermochemistry data from quantum chemistry logfiles Found symmetry number 1 in methane-g3-298.log DeltaHform(0K) -16.2427kcal/mol DeltaHform(298.149K)-18.1592kcal/mol DeltaSfo

Re: [OpenBabel-Devel] Thermochemistry

2015-02-01 Thread Geoffrey Hutchison
No, I think it makes much more sense to either do this as a separate obthermo program or a Python script. My group has several such scripts using either OB or cclib for parsing data from QM output. Geoff On Sun, Feb 1, 2015 at 4:58 AM David van der Spoel wrote: > Hi, > > I have previously contr

[OpenBabel-Devel] Thermochemistry

2015-02-01 Thread David van der Spoel
Hi, I have previously contributed some code to extract thermochemistry data from Gaussian log files, now my group are considering extending that somewhat. The data are gathered when reading a Gaussian log file containing the right information and stored in .sdf files. However it might be usefu