> If i use: obminimize [-ff forcield] [-algorithm] to calculate the
> minimized energy of a given ligand a don't always get the same results. (of
> course I only compare results with the same ligande, same forcefield and same
> algorithm with each other)
I'm not quite sure I understand what
> I don't know whether people would like to implement this new GAFF2 into
> BABEL...
Sure, although as David van der Spoel mentioned, there was a considerable
effort in updating the parameters and typing recently.
Personally, I'd push to see if the GAFF2 developers can set up a
