Hi,
if you intend to use a DICOM reader in Paraview, why not using
directly GDCM, instead of ITK? It contains a VTK Reader... If I am
right, you will just have to write the XML/CMake files that make the
reader available in Paraview.
In my case, I use the vtkDICOMImageReader, that is a very simple
Hi,
My name is chewping and I’m doing my master’s research in the University of
Malaya, Malaysia. I’m using ParaView and MPI to visualize a relatively large
medical data set in a homogeneous cluster environment. It consists of one
master node and 9 slave nodes in a Local Area Network with cla
Hi everyone.
I am wondering if anyone know how to integrate a ITK(GDCM) based DICOM
reader to Paraview?
My basic idea is:
1. Read DICOM series data through ITK(GDCM)
2. Export the data to a vtkImageImport class
3. Use the data in vtkImageImport as a source of Paraview
I have done the first two step
I am afraid not. You can convert it to unstructured grid using
tetrahedralization and volume render that. Alternatively you can
resample it to a uniform rectilinear grid (image data). I can explain
how to do that if you want.
-berk
On Wed, Feb 4, 2009 at 2:59 PM, Weiguang Guan wrote:
> Hello,
>
Yes, yes, yes, and yes.
-Ken
On 2/5/09 3:47 PM, "Jim Montine" wrote:
So in this case, pvserver is using the hardware GPU to render to an off-screen
context?
It must also then be doing a pixel readback before it sends the image to the
client?
On my server I have several proceesors and one g
So in this case, pvserver is using the hardware GPU to render to an off-screen
context?
It must also then be doing a pixel readback before it sends the image to the
client?
On my server I have several proceesors and one gfx card. If I do something
like:
mpirun -np 4 pvserver --use-offscre
I don't know the answer to this question, but you may want to look at the code
for the pqObjectInspectorWidget::accept() method. This is the method that gets
called when you hit the Apply button.
-Ken
On 2/5/09 2:49 PM, "Juan Fernando Duque Lombana" wrote:
Good day,
I'm a newbie in this bi
You need the DISPLAY environment variable because the standard way to get a gfx
context on *nix is through an X server. To create an off-screen rendering
context you first have to connect to an X server. It is also a convenient way
to specify which GPU you want to use if a system has more than
Try clicking on the Information tab in the Object Inspector panel. If
the data ranges are huge then there is probably an endianness
misalingment. If they look roughly OK, then the data probably loaded
alright and the problem becomes how do you look at what you've loaded
properly.
After the load, C
Good day,
I'm a newbie in this big paraview world and I would like to know if there's
a way to do the following:
I'm trying to load a VRML 2.0 file using the following command:
myVRML=builder->createReader(QString("sources"),
QString("vrmlreader"),QStringList(temp), s);
Where temp contains the
On Thu, Feb 5, 2009 at 3:26 PM, Jim Montine wrote:
> Hi,
>
> Thanks for the information. Two quick follow-up questions.
>
> In case 1 below (where the server reads the file and executes filtering
> operations but does
> no rendering), is it worthwhile to do an mpirun pvserver in this mode? Will
Hi,
Thanks for the information. Two quick follow-up questions.
In case 1 below (where the server reads the file and executes filtering
operations but does
no rendering), is it worthwhile to do an mpirun pvserver in this mode? Will
the server do parallel work
in this case?
In case 2 below
Hi,
first of all, thanks for your answer.
For my MHA file, this is exactly the procedure used to open this file:
- open the MHA file and choose the meta file format
- click on apply button then a white box appears
- click on contour and apply buttons and a volume appears as shown in the
attache
On Thu, Feb 5, 2009 at 2:09 PM, Jim Montine wrote:
> I download and I am running paraview 3.4.0. I run pvserver on a linux
> cluster (where a .cas data file to visualize resides) andI run paraview on
> my Windows laptop.
>
> First I tried running: pvserver --use-offscreen-rendering on the server
I download and I am running paraview 3.4.0. I run pvserver on a linux cluster
(where a .cas data file to visualize resides) andI run paraview on my Windows
laptop.
First I tried running: pvserver --use-offscreen-rendering on the server (which
has gfx hardware) without setting
DISPLAY properl
If you do not see the bounding box outline, and the contour button is
not pressable, make sure you have hit the Apply button on the
Properties tab of the Object Inspector Panel after choosing the
filename to open.
> If you do see a white box after loading the data than you have a few
> options:
>
I only downloaded TumorSimData_001.zip and only opened
SimTumor001_Gad.mha, but it displayed fine for me.
What version of ParaView are you using?
Did you see only the white outline of the data?
This volume is big enough that my ParaView (I've messed with the
configuration extensively.) shows
Hi Paraviewers,
I am a new user of this tool and i would like to visualise MHA files downloaded
from http://www.ucnia.org/softwaredata/5-tumordata/10-simtumordb.html using the
PARAview tool.
So when i opened my MHA file and I chose the meta file format the image is not
displayed.
I would like to
In your plugin's CMakeLists file, use FIND_PATH and FIND_LIBRARY to
let the cmake user choose the include and lib directories for ALGLIB
respectively. Then use INCLUDE_DIRECTORIES and TARGET_LINK_LIBRARIES
to let the compiler know about them.
On Thu, Feb 5, 2009 at 9:29 AM, Syrkina Ekaterina wro
Hallo,
I want to use some of special functions implemented in
http://www.alglib.net/ for my paraview filter. How should I change my
CmakeLists.txt and (maybe) server manager xml for that? ALGLIB doesn't
have any CmakeLists or makefile.
Is there any documentation on that? Or is there inverse of i
I found that exporting the IntegrateAttributes results in the form of a
vtkTable allowed me to display all in one spreadsheet. (names are used
for the first column)
Same link as before.
JB
Hi,
I have modified the vtkIntegrateAttributes to be a
vtkMultiBlockDataSetAlgorithm.
Now I would li
Hi,
I have modified the vtkIntegrateAttributes to be a
vtkMultiBlockDataSetAlgorithm.
Now I would like to have a histogram with the names of the blocks on the X
axis and the integrated variables on the Y axis.
Alternatively, I would like to be able to see the results for all the blocks
in the sa
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