Re: [Paraview] Given 2D Displacement Field, Visualize Stretch as Geometric Change in Mesh

2018-01-10 Thread Cory Quammen
Great, thanks for the follow up. Cory On Wed, Jan 10, 2018 at 10:58 AM, Charlie Talbot wrote: > That seems to work, thank you very much! I had some issues with Paraview 5.0 > (crashed upon python calculation) but this did indeed work after upgrading > to Paraview 5.4 > > On

Re: [Paraview] ParaView - Variables and different Time Steps

2018-01-10 Thread Utkarsh Ayachit
The easiest way to do such a thing is as follows: 1. Apply Extract TimeSteps filter to your reader/source to choose the timesteps of interest. 2. Apply Group TimeSteps filter to it to group the timesteps extracted in (1) into a mutliblock dataset with 1 block for each selected timestep in order.

Re: [Paraview] Compile Error of Paraview on Maverick

2018-01-10 Thread Cory Quammen
I don't see any errors in the terminal output you've posted. Are there errors further back in the terminal output history? Thanks, Cory On Wed, Jan 10, 2018 at 12:28 AM, Yangguang Liao wrote: > Hi, > > Trying to compile Paraview but get such error. I have no idea what is the

[Paraview] ParaView - Variables and different Time Steps

2018-01-10 Thread Carolin Helbig
Dear ParaView team, I read a post at the ParaView website concerning variables and different time steps (see https://public.kitware.com/pipermail/paraview/2014-May/031054.html). I have a similar problem and I want to access values from different time steps using the programmable filter with

Re: [Paraview] Glyph type options

2018-01-09 Thread Cory Quammen
Replying back to the list so that others may benefit from and contribute to the conversation. Rotate is an advanced property. To show advanced properties, look in the Properties panel. Click the gear icon to the right of the text box that says "Search ...". You can also search for "Rotate" in

Re: [Paraview] Given 2D Displacement Field, Visualize Stretch as Geometric Change in Mesh

2018-01-09 Thread Cory Quammen
Charlie, You can use the Warp by Vector filter to warp the points in your data set according to a vector field. To get that vector field from your p_x and p_y scalar arrays, it is convenient to use the Python Calculator with the expression make_vector(p_x, p_y, np.zeros(p_x.shape)) Apply the

Re: [Paraview] Glyph type options

2018-01-09 Thread Cory Quammen
Reduce the value of the "Scale Factor" property in the Glyph filter to reduce the glyph size. On Tue, Jan 9, 2018 at 11:21 AM, Sonya Davydycheva wrote: > Hello, > > I wonder if there is any option to change SIZE of the glyphs (arrows or > spheres)? They look enormously large

[Paraview] Glyph type options

2018-01-09 Thread Sonya Davydycheva
Hello, I wonder if there is any option to change SIZE of the glyphs (arrows or spheres)? They look enormously large and tend block each other on my scalar data set while using Glyph option. I will appreciate any tip. Sonya Davydycheva (713)498-6139

Re: [Paraview] Scaling cylinder glyph's radius and height individually

2018-01-09 Thread Cory Quammen
Hi Ahmad, Alas, reading the code of vtkGlyph3D, you cannot orient by a vector array different from the vector array used to do the scaling using the functionality in ParaView. You would have to modify either vtkPVGlyphFilter or its parent class vtkGlyph3D, to do this, and expose the new VTK class

Re: [Paraview] Reading group of pvti files: vtkImageData is static over time

2018-01-09 Thread Ahmad .
Sorry wrong link in my last e-mail. This is the correct one: https://gitlab.kitware.com/paraview/paraview/issues/17732 Van: Ahmad . Verzonden: dinsdag 9 januari 2018 14:27 Aan: paraview@paraview.org Onderwerp: Re: Reading group of pvti

Re: [Paraview] Reading group of pvti files: vtkImageData is static over time

2018-01-09 Thread Ahmad .
Was about to create a new question about this, but I remembered I had asked it already a few months back ;-) However I didn't receive a reply unfortunately. Does anyone have a clue? I also opened an issue about this on gitlab: https://gitlab.kitware.com/paraview/paraview/issues/17698 There

Re: [Paraview] Scaling cylinder glyph's radius and height individually

2018-01-09 Thread Ahmad .
Just want to add that a programmatic (C++) solution is preferred rather than using the GUI I have a C++ pipeline where I can set the properties of the cylinder glyph with vtkSMPropertyHelper. I have looked in filters.xml under vtkPVGlyphFilter source proxy (file located in

[Paraview] ParaView 5.x not showing all objects available in Pipeline Browser

2018-01-08 Thread Omid Mahabadi
Hi, I use ParaView to visualize data of our simulations using the Unstructured Grid data format. Up until ParaView 4.x everything worked fine: we typically visualize one set of data files as Surfaces and another as Wireframe. The Wireframe dataset refers to "fracture lines" in our simulations.

Re: [Paraview] Plot selection over time for threshold

2018-01-08 Thread Moreland, Kenneth
Jairaj, I’m not sure what exactly you mean by “the threshold,” but there are many ways to plot the average of a threshold-selection of cells over time. The most straightforward way is to open up the Find Data dialog box, select the cells you want to plot, and then create a Plot Selection Over

Re: [Paraview] Glyphs and spreadsheets

2018-01-08 Thread Salazar De Troya, Miguel
Ok, I see that the Points field represent the points of the Glyph object. For instance, if we are using 2D Glyph as the Glyph type, there will be 4 entries in the Spreadsheet view with the same GlyphVector field, but different Point values. These 4 points represent the points used to draw the

[Paraview] Glyphs and spreadsheets

2018-01-08 Thread Salazar De Troya, Miguel
Hello, I want to extract the output from a Glyph filter into a spreadsheet. I want the coordinates of the origin of each glyph and its components so I can plot the same vectors using matplotlib.quiver capability. I tried to do this using the Spreadsheet view, but I ran into some issues: -

[Paraview] Scaling cylinder glyph's radius and height individually

2018-01-08 Thread Ahmad .
Dear community, When I try to scale cylindrical glyph objects by a 'Scalar', it scales both the radius and height of the glyphs. Is there a way to scale the radius by a Scalar1, and the height be a Scalar2? I have an unstructured grid, and for each point I want to create a cylinder that can

Re: [Paraview] Question about build paraview

2018-01-08 Thread Cory Quammen
Ah, that's right, Ken. It has been a while since I have done this, but you are right that setting CC and CXX is the way to do it. On Mon, Jan 8, 2018 at 11:29 AM, Moreland, Kenneth wrote: > Actually I find the easiest way to do it is, assuming you have icc in your > path, to

Re: [Paraview] Question about build paraview

2018-01-08 Thread Moreland, Kenneth
Actually I find the easiest way to do it is, assuming you have icc in your path, to set the CC and CXX environment variables on the command of the first run of cmake (or ccmake or cmake-gui, whichever one you are using). So the start of your build would be something like this: mkdir

Re: [Paraview] PV client-server: browsing remote files

2018-01-08 Thread Robert Sawko
Sebastien and Utkarsh, Thanks for both of your suggestions. I have now looked at them and they both look pretty good to me. I'll practice with these solutions and see which one I like best. Kind Regards, Robert -- Science personalities series: calculus and charity

Re: [Paraview] error when compiling Paraview 5.4 macOS 10.13

2018-01-08 Thread Cory Quammen
Sergio, This problem was fixed in November 2016, so I am surprised you are running into it. Current ParaView master includes VTK that contains the commit commit 33631146a85dfa64433c3997f166cbaa96bedee9 Author: gnzlbg Date: Wed Nov 23 05:29:14 2016 -0500 [bugfix]

Re: [Paraview] Question about build paraview

2018-01-08 Thread Cory Quammen
It's kind of a quirk of CMake, but once CMAKE_CXX_COMPILER is set by the initial CMake configuration, you can't change it. So what should you do? The solution is to set an environment variable named CMAKE_CXX_COMPILER in your shell prior to running CMake for the first time. Set that variable to

[Paraview] error when compiling Paraview 5.4 macOS 10.13

2018-01-08 Thread Sergio Emanuel Galembeck
Hello, I am trying to compile Paraview 5.4 in MacOS 10.13.2 (High Sierra), using software from MacPorts 2.4.2. After a successful configuration, the make -j 4 command give the following error:

[Paraview] Question about build paraview

2018-01-07 Thread Yangguang Liao
Hi, Anyone has experience build paraview on TACC Maverick or other clusters before? I need to build my own paraview. I use superbuild to build paraview. but everytime it stop at the step of configure paraview due to GCC version is lower than 4.6. Maverick does have GCC 4.9 and 5.4 installed and

Re: [Paraview] About CmakeLists.txt for paraview plugin

2018-01-07 Thread Yangguang Liao
I see, yes, I will use some classes in Paraview/VTK, which mean if your plugin use inside source you will need to build your own paraview to run it? Thanks, Yangguang On Sun, Jan 7, 2018 at 6:56 AM, Utkarsh Ayachit wrote: > Doesn't your plugin need other classes

Re: [Paraview] About CmakeLists.txt for paraview plugin

2018-01-07 Thread Utkarsh Ayachit
Doesn't your plugin need other classes from VTK/ParaView? If so, you can't mix and match. I am afraid you'll have to build ParaView from source and then compile the plugin against it. On Sun, Jan 7, 2018 at 12:20 AM, Yangguang Liao wrote: > Hi, > > I used some vtkOpenGL class

Re: [Paraview] PV client-server: browsing remote files

2018-01-06 Thread Sebastien Jourdain
You can find another way to do it here as well: https://github.com/Kitware/ParaView/blob/master/Web/Python/paraview/web/protocols.py#L2692-L2695 https://github.com/Kitware/ParaView/blob/master/Web/Python/paraview/web/protocols.py#L2715-L2716 [...] On Sat, Jan 6, 2018 at 12:03 PM, Utkarsh Ayachit

Re: [Paraview] PV client-server: browsing remote files

2018-01-06 Thread Utkarsh Ayachit
Robert, Sorry I missed the email earlier. What you have as an alternative is indeed a reasonable approach. Once can also use ParaView's infrastructure used by the file dialog, but it's a little clunky currently, since it needs to be pythonified for easier user. Here's how you'd do this with

[Paraview] Plot selection over time for threshold

2018-01-05 Thread Jairaj Mathur
Dear all How can I plot the average over time of only the threshold cells? It should only average the cells that are within the threshold. Thanks a lot! -- Jairaj Mathur, Mechanical Engineering Washington University in St Louis ___ Powered by

Re: [Paraview] PV client-server: browsing remote files

2018-01-05 Thread Robert Sawko
Hi, I will bump my own post from a month back (see below) and just will answer the question in case anyone else was looking for something similar. I haven't found a way to remotely navigate the file system through ParaView Python API objects, but of course there are other Python packages which

[Paraview] Paraview crashes with XDMF3 Reader

2018-01-04 Thread LB
Hi, When I try to open XDMF files, ParaView crashes when I use the XDMF3 Reader. It seems to load fine with the classical "XDMF Reader". I've had this issue with the following version of ParaView : - Paraview 5.4.1 under Windows 7 - Paraview 5.0.1 under Linux 64 I've open a ticket in the bug

Re: [Paraview] [EXTERNAL] Error about reading .pvtk file

2018-01-03 Thread Moreland, Kenneth
Yangguang, If the file size is not too big and you are using the Kitware build of ParaView, here are 2 other things you might want to check (although they seem less likely than what you already checked). Corrupt files. Make sure the files did not get corrupted when you copied them to your

Re: [Paraview] [EXTERNAL] Error about reading .pvtk file

2018-01-03 Thread Yangguang Liao
I tried kitware download and my own build. both get crash. and I use windows. On Wed, Jan 3, 2018 at 6:53 PM, Scott, W Alan wrote: > Is the ParaView a kitware download? What OS? > > > > Alan > > > > *From:* Yangguang Liao [mailto:ygl...@ucdavis.edu] > *Sent:* Wednesday,

Re: [Paraview] [EXTERNAL] Error about reading .pvtk file

2018-01-03 Thread Scott, W Alan
Is the ParaView a kitware download? What OS? Alan From: Yangguang Liao [mailto:ygl...@ucdavis.edu] Sent: Wednesday, January 3, 2018 7:52 PM To: Scott, W Alan Cc: paraview@paraview.org Subject: Re: [EXTERNAL] [Paraview] Error about reading .pvtk file I don't think so. the

Re: [Paraview] [EXTERNAL] Error about reading .pvtk file

2018-01-03 Thread Yangguang Liao
I don't think so. the test file is not big. and I check the memory usage of paraview on remote machine, it is only 500MB. and My local machine should have enough memory space. On Wed, Jan 3, 2018 at 6:27 PM, Scott, W Alan wrote: > Overflowing memory? Try looking at the

Re: [Paraview] [EXTERNAL] Error about reading .pvtk file

2018-01-03 Thread Scott, W Alan
Overflowing memory? Try looking at the amount of memory you are using on the cluster, then again on your local computer. View/ Memory Inspector. Alan From: ParaView [mailto:paraview-boun...@paraview.org] On Behalf Of Yangguang Liao Sent: Wednesday, January 3, 2018 7:26 PM To:

[Paraview] Error about reading .pvtk file

2018-01-03 Thread Yangguang Liao
Hi, I am trying to read a pvtk file with data store in vtk file. when I read it on my own local computer, paraview will always crash. but when I read it by using paraview on remote supercomputer, it works. May I ask why? I used a MPI supported version in my local computer. did I miss something in

[Paraview] n-D reader wanted

2018-01-03 Thread eric greenwade
Prior to writing one, I’m interested to see if someone has done this previously. I have n-D rectilinear, structured data (usually 4-10D) with a small number of dependent variables. We’re adding output code to our apps that will create vtkTable files for the results. What I would like is a paraview

Re: [Paraview] Confirming that pvserver runs with OSMesa + OpenSWR driver on cpu only compute nodes

2018-01-02 Thread Burlen Loring
Hi Fabrizio, in the shell where you launch your pvserver you could set the following environment variables: export LIBGL_ALWAYS_SOFTWARE=1 GALLIUM_DRIVER=swr this is bash syntax, your shell may be different. When I do that I see "SWR detected AVX" print in that shell when the connection

[Paraview] How to plot selection over time of slice

2018-01-02 Thread Kurt Sansom
Hi all, I have a simulation where I have exported the inlets and outlets of a domain. I was able to use a box clip for each inlet/outlet, calculate the flux through each face, integrate, and then plot selection over time. I was able to plot flow overt time. (this worked) steps that work: 1)

Re: [Paraview] Updated OpenFOAMReader supporting OpenFOAM 5.x

2018-01-02 Thread Allie Vacanti
It looks like there are some issues preventing us from reviewing/merging this patch, as I mentioned on the merge request here: https://gitlab.kitware.com/vtk/vtk/merge_requests/3750 Once those are addressed we can do a more thorough code review/testing cycle. Thanks! Allie On Wed, Dec 27, 2017

Re: [Paraview] Parview Build Faulure on Mac OS 10.12.6

2017-12-22 Thread Ben Boeckel
On Thu, Dec 21, 2017 at 23:37:55 +, Beach, Timothy A. (GRC-LTE0)[Vantage Partners, LLC] wrote: > Helo, I’ve been working through some issues compiling on a new MAC > but this one has me stuck. I used CMAKE 3.10 to generate xcodebuild > files for paraview 5.4. Any ideas? Yep, Working on a

Re: [Paraview] Pointer graphical and actual locations misaligned

2017-12-22 Thread Aron Helser
Hi Keith, Yes, this is a known bug in some Intel graphics drivers, on Windows, and I believe we've seen something similar on Linux, as well. If your lucky enough to be running an Optimus laptop, just switching ParaView to use the nvidia card fixes the problem. Intel has also fixed the bug in their

Re: [Paraview] Parview Build Faulure on Mac OS 10.12.6

2017-12-21 Thread Fabian Wein
First question: do you use the superbuild? On 12/22/17 00:37, Beach, Timothy A. (GRC-LTE0)[Vantage Partners, LLC] wrote: Helo,  I’ve been working through some issues compiling on a new MAC but this one has me stuck.   I used CMAKE 3.10 to generate xcodebuild files for paraview 5.4. Any ideas?

[Paraview] Parview Build Faulure on Mac OS 10.12.6

2017-12-21 Thread Beach, Timothy A. (GRC-LTE0)[Vantage Partners, LLC]
Helo, I’ve been working through some issues compiling on a new MAC but this one has me stuck. I used CMAKE 3.10 to generate xcodebuild files for paraview 5.4. Any ideas? Thanks Tim make: *** No rule to make target `/Users/…/lib/cmake/paraview-5.4/Modules/vtkCommonCoreHierarchy.txt', needed

Re: [Paraview] 3D visualization of vectors as vtk-files

2017-12-21 Thread Samuel Key
Sonya-- Attached are two files: (1) *.pvd, a ParaView data "mother" file, and (2) *.vtu with velocity vectors at each finite element vertx nodal point. Hope this helps --Sam On 12/21/2017 1:36 PM, Sonya Davydycheva wrote: Hello, Can anybody please send me a sample *.vtk file containing

[Paraview] 3D visualization of vectors as vtk-files

2017-12-21 Thread Sonya Davydycheva
Hello, Can anybody please send me a sample *.vtk file containing VECTOR fields? I need it to start study options how to 3D-visualize, say, electromagnetic field or currents. I can visualize separate components as scalars using "Glyph" and having each component as a separate vtk-file (coordinates

Re: [Paraview] Python shell, os.environ

2017-12-21 Thread Ben Boeckel
On Thu, Dec 21, 2017 at 15:14:01 +, Heiland, Randy wrote: > Thanks Ben. You’re right, of course. Moreover, my idea for having > (non-admin) users install additional Python modules (e.g., scipy) into > PV’s dir, is a not going to go well. Well, if `sys.path` or `PYTHONPATH` can be pointed to

[Paraview] Pointer graphical and actual locations misaligned

2017-12-21 Thread Lewis, Keith B CTR NSWCDD, E22
Hello, ParaView Community: I'm using version 5.4.1 64-bit on Win10. The pull-down menu bar (File, Edit etc.) is hidden behind the window title bar. The upper row of buttons (Open, Save Data, Connect, etc.) are mostly visible, but the upper portion of the buttons are also behind the window title

Re: [Paraview] PV4.10 extracting a surface

2017-12-21 Thread Sebastien Jourdain
Or two clip filter with scalar. On Wed, Dec 20, 2017 at 11:03 PM, Andrew wrote: > Hello. Possibly the Slice filter with "Cylinder" and "Crinkle slice" > options will produce the required result (I checked in ParaView 5.2). > > 2017-12-20 18:46 GMT+03:00 Andy Bauer

Re: [Paraview] Paraview Custom Reader issue - OS X 10.12.6

2017-12-21 Thread Mathieu Westphal
Hello To build a paraview plugin, one need first to build paraview from the sources. https://www.paraview.org/Wiki/ParaView/Plugin_HowTo#Writing_Plugins Best, Mathieu Westphal On Thu, Dec 21, 2017 at 5:49 PM, Beach, Timothy A. (GRC-LTE0)[Vantage Partners, LLC] wrote:

Re: [Paraview] Paraview Custom Reader issue - OS X 10.12.6

2017-12-21 Thread Mathieu Westphal
Hello You have to set ParaView_DIR to your paraview build directory. You have to do that in cmake, ccmake or cmake-gui. Best, Mathieu Westphal On Thu, Dec 21, 2017 at 5:01 PM, Beach, Timothy A. (GRC-LTE0)[Vantage Partners, LLC] wrote: > For some time I’ve used a

[Paraview] Paraview Custom Reader issue - OS X 10.12.6

2017-12-21 Thread Beach, Timothy A. (GRC-LTE0)[Vantage Partners, LLC]
For some time I’ve used a custom reader in Paraview. I’m having issues with my recently issued mac. In the past I’ve recompiled the entire code but I’m having issues with QT so I’m trying to just get my reader working as a plugin as per the instructions on the paraview.org page

Re: [Paraview] Python shell, os.environ

2017-12-21 Thread Heiland, Randy
> On Dec 21, 2017, at 9:34 AM, Ben Boeckel wrote: > > On Wed, Dec 20, 2017 at 22:50:50 +, Heiland, Randy wrote: >> Ah, I see ‘os’ has been hijacked by PV. But something like this seems >> to accomplish what I want, maybe… >> >> Create a new module for PV: >> >>

[Paraview] XDMF Part Grids sharing the same Geometry array

2017-12-21 Thread Andreyev, Andrey
Hello, I am currently converting our FEA code to write out a format that Paraview can read natively. I chose XDMF because it seems like a fairly flexible format. I have a question with regards to topology/geometry. I need to split up my FEA mesh according to the part the elements belong to and

Re: [Paraview] loading multiple state-files without hiding and resetting already loaded objects

2017-12-21 Thread Grothausmann, Roman Dr.
Hi Cory, On 06/12/17 23:06, Cory Quammen wrote: Sorry I failed to follow up. Did you find a solution to this problem? Many thanks for your reply. No, and I'm still stuck. I tried Your suggestion to remove [0]

Re: [Paraview] Python shell, os.environ

2017-12-21 Thread Ben Boeckel
On Wed, Dec 20, 2017 at 22:50:50 +, Heiland, Randy wrote: > Ah, I see ‘os’ has been hijacked by PV. But something like this seems > to accomplish what I want, maybe… > > Create a new module for PV: > > /Applications/ParaView-5.4.1.app/Contents/Python$ more envs.py > import os >

Re: [Paraview] Python shell, os.environ

2017-12-21 Thread Heiland, Randy
Thanks Utkarsh. Yes, running pvpython from a Terminal is indeed different from running the Python Shell in the PV app (on OS X anyway), in terms of os.environ. Regardless, hopefully my proposed approach of creating an envs.py module in the PV installation will work. I’m just looking for the

Re: [Paraview] PV4.10 extracting a surface

2017-12-20 Thread Andrew
Hello. Possibly the Slice filter with "Cylinder" and "Crinkle slice" options will produce the required result (I checked in ParaView 5.2). 2017-12-20 18:46 GMT+03:00 Andy Bauer : > The Threshold filter works by selecting cells that have cell data in the > selected range.

Re: [Paraview] Python shell, os.environ

2017-12-20 Thread Utkarsh Ayachit
Randy, No, `os` hasn't been hijacked by PV. Here's what I get on Linux. ./bin/pvpython Python 3.5.2 (default, Nov 23 2017, 16:37:01) [GCC 5.4.0 20160609] on linux Type "help", "copyright", "credits" or "license" for more information. >>> import os >>> os.environ["FOO"] '12' I suspect it's

Re: [Paraview] Python shell, os.environ

2017-12-20 Thread Heiland, Randy
Ah, I see ‘os’ has been hijacked by PV. But something like this seems to accomplish what I want, maybe… Create a new module for PV: /Applications/ParaView-5.4.1.app/Contents/Python$ more envs.py import os os.environ['PHYSICELL_DATA']=‘/fill_in_path’ and then in the PV Python shell, the

[Paraview] Python shell, os.environ

2017-12-20 Thread Heiland, Randy
I noticed the Python shell has a very limited os.environ, e.g.: >>> os.environ {'SHELL': '/bin/bash', 'SSH_AUTH_SOCK': '/private/tmp/com.apple.launchd.y86uYmHWFV/Listeners', 'XPC_FLAGS': '0x0', '__CF_USER_TEXT_ENCODING': '0x1F5:0x0:0x0', 'Apple_PubSub_Socket_Render':

Re: [Paraview] paraview GUI entry point not found in win10, compiled with qt 5.10 and vs 2017.

2017-12-20 Thread 程迪
Thank you! it works! I found it conflict with my miniconda python, which uses and contains qt5.6.2 Di Cheng Engineer of Research and Development Center, visiting scholar at University of Connecticut China Academy of Aerospace Aerodynamics Phone @ China: +86-l58Ol5949ll Phone @ US: +l-86O-6l7-l886

Re: [Paraview] [EXTERNAL] Re: getting Client Info

2017-12-20 Thread Scott, W Alan
Good idea. Thanks. I wrote it up. https://gitlab.kitware.com/paraview/paraview/issues/17902 Alan From: ParaView [mailto:paraview-boun...@paraview.org] On Behalf Of Cory Quammen Sent: Wednesday, December 20, 2017 8:04 AM To: Heiland, Randy Cc: ParaView

Re: [Paraview] PV4.10 extracting a surface

2017-12-20 Thread Andy Bauer
The Threshold filter works by selecting cells that have cell data in the selected range. If you're requesting to do thresholding on a point data array then it will use the point data to cell data filter to create a cell data array and threshold on that. With this, it's very unlikely that any cell

Re: [Paraview] PV4.10 extracting a surface

2017-12-20 Thread Utkarsh Ayachit
I believe you're getting the warning because the threshold ended up not producing any output. If you can attach the state/data file, I may be able to can give more info. Utkarsh On Wed, Dec 20, 2017 at 10:15 AM, Stephen Wornom wrote: > The geometry is a cylinder. >

Re: [Paraview] PV4.10 extracting a surface

2017-12-20 Thread Stephen Wornom
Forgot to mention that the mesh is 3D x,y,z. rad =sqrt( x**2+y**2) thus varies with the z-coordinate. Stephen - Original Message - > From: "Stephen Wornom" > To: "ParaView" > Sent: Wednesday, December 20, 2017 4:15:43 PM > Subject:

[Paraview] PV4.10 extracting a surface

2017-12-20 Thread Stephen Wornom
The geometry is a cylinder. Using the calculator I do rad =sqrt( x**2+y**2) I would like to extract the cylinder surface which is rad = 0.1 I click on threshold then information to see rad 0.1

Re: [Paraview] getting Client Info

2017-12-20 Thread Mathieu Westphal
Hello At least some of these information can be recovered via the PythonShell : >>> GetParaViewSourceVersion() 'paraview version 5.4.1-1057-g3ffb4b3e0a' >>> GetParaViewVersion() 5.4 Best, Mathieu Westphal On Wed, Dec 20, 2017 at 4:04 PM, Cory Quammen wrote:

Re: [Paraview] getting Client Info

2017-12-20 Thread Cory Quammen
On my Mac, I can copy individual cells, but not the whole table. It would be a nice feature. Feel free to write up a feature request in the issue tracker: gitlab.kitware.com/paraview/paraview/issues Thanks, Cory On Wed, Dec 20, 2017 at 8:26 AM, Heiland, Randy wrote: > On the

Re: [Paraview] paraview GUI entry point not found in win10, compiled with qt 5.10 and vs 2017.

2017-12-20 Thread Cory Quammen
Check your PATH environment variable to make sure nothing is inserting a path Qt DLLs different from the Qt with which you built ParaView. Note that CMake installs Qt DLLs, so if you have that installed, your PATH may be set to point to those DLLs. HTH, Cory On Tue, Dec 19, 2017 at 7:01 PM, 程迪

[Paraview] getting Client Info

2017-12-20 Thread Heiland, Randy
On the “About ParaView” popup window, there’s a “Client Information” tab, but I can’t seem to copy/paste that info. Is there a way to easily get it? I happen to be on OS X, but interested for all OSes. thanks, Randy ___ Powered by www.kitware.com

Re: [Paraview] [vtkusers] How to create vtk/vtp file where is possible to enable/disable visibility of some objects

2017-12-19 Thread Mathieu Westphal
Hello Redirecting your mail to ParaView ML. This simplest way to do that is to use MultiBlockDatasets (.vtm) files. You can experiment in ParaView using the SphereSource, GroupDataset filter and Multiblock Inspector Dock widget. Best, Mathieu Westphal On Tue, Dec 19, 2017 at 8:25 AM, Alexey

[Paraview] corrupt k-d tree error.

2017-12-19 Thread Ufuk Utku Turuncoglu (BE)
Hi All, When i try to run my simulation code integrated with ParaView Catalyst, i am getting error like following in certain number of processors, ERROR: In /okyanus/users/uturuncoglu/progs/paraview-5.4.1/src/VTK/Common/DataModel/vtkKdTree.cxx, line 1945 vtkKdTree (0xeaa0660):

[Paraview] Using Paraview record stress of soil in Opensees

2017-12-18 Thread QUANG NGUYEN
Hi every one! I want to use Paraview to record stress time history in OpenSees of soil domain of soil-structure problem. Do you know how to do that. I try with displacement of soil domain with this code: "recorder pvd Paraview_Output basic disp -nodeRange 1 $numTotalNode" and it work, but I do not

Re: [Paraview] open .pvsm file

2017-12-18 Thread Joachim Pouderoux
Hi, For your information, since this change: https://gitlab.kitware.com/paraview/paraview/merge_requests/1704 and ParaView 5.4.1, you should be able to open a pvsm by specifying its name on the command line, without using the option --state= ... and consequently open state files easily from a

Re: [Paraview] open .pvsm file

2017-12-18 Thread mirko heuegger
Hello! Paraview.exe has an command-line option for loading state-files: paraview.exe --state= so maybe this might be helpful. best regards mirko On Mon, Dec 18, 2017 at 11:17 AM, Mathieu Westphal < mathieu.westp...@kitware.com> wrote: > Hello > > Indeed, there is no way yet to be able to

Re: [Paraview] Color bar labels

2017-12-18 Thread Cory Quammen
Hi Quentin, In the refactor of the color bar, we decided to replace the unreliable "number of labels" option with a list of explicit labels you can set. The number of labels option was only a maximum number of labels and often didn't give you the requested number. To use the new list option, turn

Re: [Paraview] installing additional Python modules

2017-12-18 Thread Heiland, Randy
Only heard crickets on this one :-) I’ve spent some time looking into this and here’s some of what I've discovered so far (I was jumping between OSX and Win10): 1) Stay away from trying to mix Anaconda/conda Python distribution with any other Python distro (including PV’s) [1] 2) Use/install

Re: [Paraview] open .pvsm file

2017-12-18 Thread Mathieu Westphal
Hello Indeed, there is no way yet to be able to open a state file with a double click in the file explorer. Best, Mathieu Westphal On Mon, Dec 18, 2017 at 11:11 AM, Klara Schevenels < klara.scheven...@kuleuven.be> wrote: > Okay, when I do this starting from Paraview, it works! But when I

Re: [Paraview] open .pvsm file

2017-12-18 Thread Mathieu Westphal
Hello A .pvsm is not a "Data" file but a "State" file, you need to use "File->Load Stat" Best, Mathieu Westphal On Mon, Dec 18, 2017 at 11:04 AM, Klara Schevenels < klara.scheven...@kuleuven.be> wrote: > > > > > *From:* Klara Schevenels > *Sent:* zondag 17 december 2017 18:11 > *To:*

[Paraview] open .pvsm file

2017-12-18 Thread Klara Schevenels
From: Klara Schevenels Sent: zondag 17 december 2017 18:11 To: 'paraview@paraview.org' Subject: open .pvsm file Hi all, How to open a .pvsm state file? When I try this, the program says that a reader to open this kind of files could not be found and that I should

[Paraview] Color bar labels

2017-12-15 Thread Quentin d'Avout
Hi all, there used to be (in 5.0.1) a field for setting the number of labels for color bars in the color bar settings window (summoned by clicking the icon with the color bar with the little "e" in bold font on it). Not anymore in 5.4.1 (or at least in the nightly build I got last week). Could

Re: [Paraview] plot colors: function value -> RGB tuple

2017-12-14 Thread Moreland, Kenneth
You can achieve this by writing making a filter that creates a 3D vector field where each vector represents an RGB color. If writing out floating point values, the color channel values should be between 0 and 1. You can then render this 3D vector field directly as colors by turning off the “Map

[Paraview] plot colors: function value -> RGB tuple

2017-12-14 Thread Nico Schlömer
Hi everyone, I need to plot complex-valued functions over various domains, and instead of splitting the values into real and imaginary part (or absolute value and angle), I would like to use a "2D colormap" approach as sometimes suggested for complex-valued functions (see, e.g., [1]). As a lowkey

Re: [Paraview] Missing paraview binary in Conda package

2017-12-13 Thread Chong Luo
Thanks for the suggestion. Done. https://github.com/conda/conda/issues/6452 On 13 December 2017 at 10:04, Cory Quammen wrote: > If you don't get a response here, you might have better luck checking with > the Conda folks who provide the ParaView Conda package. > > On

Re: [Paraview] Missing paraview binary in Conda package

2017-12-13 Thread Cory Quammen
If you don't get a response here, you might have better luck checking with the Conda folks who provide the ParaView Conda package. On Wed, Dec 13, 2017 at 12:28 PM, Chong Luo wrote: > I installed paraview in Miniconda on my linux desktop: >

[Paraview] Missing paraview binary in Conda package

2017-12-13 Thread Chong Luo
I installed paraview in Miniconda on my linux desktop: https://anaconda.org/conda-forge/paraview However, there is only paraview-config under ~/miniconda3/bin/, and no binary "paraview". Is this a bug? ___ Powered by www.kitware.com Visit other

Re: [Paraview] v5.4.0 and v5.4.1 client-server disconnect while splitting views

2017-12-13 Thread Utkarsh Ayachit
Bucky, What happens if you don't split, instead close the current view and create a new render view in its stead? Do you get the same segfault? Utkarsh On Wed, Dec 13, 2017 at 9:49 AM, Kashiwa, Bucky wrote: > We are getting a very weird kind of client-server disconnect that

[Paraview] v5.4.0 and v5.4.1 client-server disconnect while splitting views

2017-12-13 Thread Kashiwa, Bucky
We are getting a very weird kind of client-server disconnect that seems to be associated with crash that is triggered while splitting the view into two or more parts. (This happens on either client-server OS pairs of mac-linux or linux-linux, in case that may matter.) A backtrace from the server

[Paraview] installing additional Python modules

2017-12-12 Thread Heiland, Randy
Any good advice for installing additional 3rd party modules for pvpython? In a Programmable Source I’d written to read in MATLAB (.mat) data files, I was using the scipy module (scipy.io.loadmat). When I wrote that, I naively thought to myself - WOW, it sure was convenient that they included

Re: [Paraview] curvilinear CF conventions

2017-12-12 Thread Moreland, Kenneth
David, The ParaView netCDF/CF reader does support the coordinates specified in Section 5.2. As the name of that section implies, this specification of coordinates applies explicitly to latitude and longitude coordinates. The rational, as far as I can tell, is that the direction of each

[Paraview] Set cells in unstructured grid

2017-12-12 Thread Petr Valenta
Hello, I have a particle code that is integrated with Catalyst. It exports particles using a vtkUnstructuredGrid containing only points and VTK_VERTEX cells that index them. Initially, the cells were created the following way: grid->Allocate(num_cells); vtkIdType cell_id[1]; for(vtkIdType

Re: [Paraview] curvilinear CF conventions

2017-12-11 Thread David Deepwell
Hi Ken, So section 5.2 (http://cfconventions.org/Data/cf-conventions/cf-conventions-1.7/cf-conventions.html#_two_dimensional_latitude_longitude_coordinate_variables) doesn’t apply for arbitrary coordinate variables? I would have thought that it would be general and not just for latitude and

Re: [Paraview] curvilinear CF conventions

2017-12-11 Thread Moreland, Kenneth
David, The way you are attempting to specify coordinates does not follow the CF convention. Your variables have a “coordinates” property that simply says “zc.” That is not sufficient in the CF convention to use that as a Z coordinate to add to the other independent coordinates. In fact, I

Re: [Paraview] [paraview] visualize higher order element.

2017-12-11 Thread Ezhilmathi Krishnasamy
Hi Andy, Thanks a lot :) this is working! this is what I want. Kind regards, Mathi On 11 October 2017 at 17:47, Andy Bauer wrote: > Hi Mathi, > > When I looked at the file in ParaView it seems like the connectivity is > wrong with your cells. If you try the Clean to

Re: [Paraview] animation: files, pgmable source

2017-12-09 Thread Utkarsh Ayachit
Randy, Here's how I'd proceed. 1. Create a programmable source to read a file series as a temporal dataset. (you have this already). 2. Let the users use ParaView to save animation or screenshots once they are satisfied. 3. You can put the "Extract TimeSteps" filter after your reader (before any

Re: [Paraview] curvilinear CF conventions

2017-12-09 Thread Moreland, Kenneth
David, The netCDF/CF reader should be able to read curvilinear coordinates. There is not enough information in your email to determine whether the issue is with the ParaView reader or an issue with the data file. It would be helpful if you could send us an example file so we can replicate your

[Paraview] curvilinear CF conventions

2017-12-09 Thread David Deepwell
Hi all, I have a netcdf file that follows the CF conventions in curvilinear (structured) coordinates. Paraview however doesn’t recognize the auxiliary variable as the grid variable on which the rest of the fields should be plotted on. I’m not sure if this a bug with paraview misinterpreting

Re: [Paraview] Memory issue for remote visualization

2017-12-09 Thread Joachim Pouderoux
Dennis, I guess in this case, the memory inspector shows the process memory limit (RLIMIT_AS) and not the system memory size. Did you consider the use of `ulimit`? You can calling something like: ulimit -u unlimited Best, Joachim *Joachim Pouderoux*, PhD *Technical Expert - Scientific

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