[Paraview] Disable automatic mesh warping

2017-11-22 Thread John Mangeri
, z) fields? I tried to use the WarpByVector filter with scale of 0.1 or smaller and that did not seem to work properly. I should mention I'm on version 5.0 (my favorite for a variety of reasons), so maybe the this WarpByVector issue is resolved in newer versions. Thanks,

[Paraview] TemporalInterpolator error

2017-10-27 Thread John Haase
ITHM_AFTER_FORWARD: 1 > FROM_OUTPUT_PORT: 0 Any idea if I can change something in my process to fix this? Regards, John R. Haase jhaa...@nd.edu ___ Powered by www.kitware.com Visit other Kitware open-source projects at http://www.kitware.com/open

Re: [Paraview] Accessing field data

2017-05-08 Thread John Haase
genfromtxt(fname[0], delimiter=',').transpose() But it's kind of annoying that I had to leave Paraview to do it. Regards, John R. Haase jhaa...@nd.edu On Mon, May 8, 2017 at 1:27 PM, John Haase wrote: > I was trying to do this via pvpython > > Regards, > > John R

Re: [Paraview] Accessing field data

2017-05-08 Thread John Haase
I was trying to do this via pvpython Regards, John R. Haase jhaa...@nd.edu On Mon, May 8, 2017 at 12:51 PM, Berk Geveci wrote: > Where are you trying to do this? The Python Console/pypython vs Python > Calculator / Programmable Filter? > > Best, > -berk > > On Wed, M

[Paraview] Accessing field data

2017-05-03 Thread John Haase
Hello Paraview, I have an Exodus II reader, reader. I'm trying to extract field data 'Full_EmissionCurrent' and 'Native_EmissionCurrent' I tried to extract the data reader.FieldData['Full_EmissionCurrent'] Array: Full_EmissionCurrent How do I actually

Re: [Paraview] (no subject)

2017-03-30 Thread John Haase
e in " + reader[0].ElementVariables + ":" but that didn't work Regards, John R. Haase jhaa...@nd.edu On Thu, Mar 30, 2017 at 3:35 PM, Utkarsh Ayachit < utkarsh.ayac...@kitware.com> wrote: > Not sure what's going on. The attached script worked just fine for me

Re: [Paraview] (no subject)

2017-03-30 Thread John Haase
kages\vtk\numpy_interface\dataset_adapter.py", line 660, in append arrLength = narray.shape[0] IndexError: tuple index out of range on the last line. Regards, John R. Haase jhaa...@nd.edu On Thu, Mar 30, 2017 at 12:32 PM, Utkarsh Ayachit < utkarsh.ayac...@kitware.com> wrote: > John, &g

Re: [Paraview] (no subject)

2017-03-30 Thread John Haase
'_Proxy__Properties', '__class__', '__del__', '__delattr__', '__dict__', '__doc__', '__eq__', '__format__', '__getattr__', '__getattribute__', '__getitem__', '__hash__', '_

Re: [Paraview] (no subject)

2017-03-29 Thread John Haase
Sorry, that's not what I wanted. I want to integrate the variable "integrateSqrVarOverSpace", over time as well. Regards, John R. Haase jhaa...@nd.edu On Wed, Mar 29, 2017 at 1:05 PM, Utkarsh Ayachit < utkarsh.ayac...@kitware.com> wrote: > Your script worked for m

Re: [Paraview] (no subject)

2017-03-29 Thread John Haase
They are very large. I believe you should be able to access them through this link https://notredame.box.com/s/qy0p9y5jg71jwxtzfey80xiq9i9udk5s Regards, John R. Haase jhaa...@nd.edu On Wed, Mar 29, 2017 at 12:06 PM, Utkarsh Ayachit < utkarsh.ayac...@kitware.com> wrote: > John, &g

[Paraview] (no subject)

2017-03-29 Thread John Haase
state file, paraview crashes. So what commands do I use to do the integral over time? I'm trying to integrate a PlotSelectionOverTime filter (with row data). I'm doing this programmatically, so attached is the python script. I have so far. Regards, John R. Haase jhaa...@nd.edu GetR2Error

[Paraview] Difference in dataset for multiple variables

2017-03-24 Thread John Haase
ve to have a ProgrammableFilter for each variable? Thank you for the advice Regards, John ___ Powered by www.kitware.com Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html Please keep messages on-topic and

[Paraview] Difference between two Exodus II files

2017-03-23 Thread John Haase
;x') and got the error Traceback (most recent call last): File "", line 1, in File "C:\Program Files\ParaView 5.2.0-Qt4-OpenGL2-Windows-64bit\bin\lib\site-packages\paraview\servermanager.py", line 1597, in __getattr__

Re: [Paraview] OnlyReportSelectionStatistics not turning off statistics

2017-03-08 Thread John
rror. Is there a different method I can use? On Tue, Mar 7, 2017 at 4:37 PM, John wrote: > Thank you. Is there a way to do something similar for points? Because I > tried to just change "CELL" to "POINT" and it did not work. >

Re: [Paraview] OnlyReportSelectionStatistics not turning off statistics

2017-03-07 Thread John
Thank you. Is there a way to do something similar for points? Because I tried to just change "CELL" to "POINT" and it did not work. Regards, John ___ Powered by www.kitware.com Visit other Kitware open-source projects at ht

[Paraview] OnlyReportSelectionStatistics not turning off statistics

2017-03-07 Thread John
have "OnlyReportSelectionStatistics = 0", I am still getting statistics rather than values. Is this a bug or am I doing sometime wrong? I've attached a simple version of my script. Thank you, John simplified.py Description: Binary data ___ Powere

Re: [Paraview] pvpython, get data over time

2017-03-06 Thread John
Hi All, I found an older post that used the SelectPoints/SelectCells methods. However, even with "OnlyReportSelectionStatistics = 0" I still am getting min, q1, med, q3, max, avg, std. My script is attached. On Mon, Mar 6, 2017 at 4:11 PM, John wrote: > Hello all, > > I&

[Paraview] pvpython, get data over time

2017-03-06 Thread John
Hello all, I'm trying to collect data over time. Using as a import the simple module from the paraview from paraview.simple import * # create a new 'ExodusIIReader' reader = ExodusIIReader(FileName=['C:\\Users\\John\\Desktop\\download\\V_171_V_d_2_um_phi_

Re: [Paraview] Problem with exporting spreadsheet view

2017-02-09 Thread John Haase
However, I just realized that if I go File > Save Data, I don't encounter the bug Regards, John R. Haase jhaa...@nd.edu On Thu, Feb 9, 2017 at 5:25 PM, Shawn Waldon wrote: > John, > > I just tried the 5.2.0 binaries on Windows 7 and I didn't see this issue, > so i

Re: [Paraview] Problem with exporting spreadsheet view

2017-02-09 Thread John Haase
Shawn, I'm using 5.2.0 on Windows 10 Regards, John R. Haase jhaa...@nd.edu On Thu, Feb 9, 2017 at 3:40 PM, Shawn Waldon wrote: > Hi John, > > I have tried this out with your data on the latest master branch of > ParaView and I can't reproduce the bug you are seeing. So

Re: [Paraview] Problem with exporting spreadsheet view

2017-02-09 Thread John Haase
Utkarsh et al., Here are the files. The data file (SteadyState_out.e) is particularly large ~500 MB. https://dl.dropboxusercontent.com/u/9655539/Integration.pvsm https://dl.dropboxusercontent.com/u/9655539/SteadyState_out.e Regards, John R. Haase jhaa...@nd.edu On Thu, Feb 9, 2017 at 11:08

[Paraview] paraview.5.1.renderingbackend.opengl on server and paraview.5.1.renderingbackend.opengl2 on client

2016-08-29 Thread John Patchett
which might just be a copy/paste from the aforementioned website…)? Thanks, —John. ___ Powered by www.kitware.com Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html Please keep messages on-topic and check the Par

Re: [Paraview] peak memory use on remote nodes

2016-04-21 Thread Biddiscombe, John A.
un and collect info whilst the paraview script is executing the rest of the pipeline. intuition and brief googling tells me that this won’t work. Can it be done? JB From: ParaView [mailto:paraview-boun...@paraview.org] On Behalf Of Biddiscombe, John A. Sent: 18 April 2016 14:53 To: David E DeM

Re: [Paraview] peak memory use on remote nodes

2016-04-18 Thread Biddiscombe, John A.
straightforward, but I will revert to your suggestion if I fail and nothing else comes up. cheers JB From: David E DeMarle [mailto:dave.dema...@kitware.com] Sent: 18 April 2016 14:48 To: Biddiscombe, John A. Cc: paraview@paraview.org Subject: Re: [Paraview] peak memory use on remote nodes Perhaps extend

[Paraview] peak memory use on remote nodes

2016-04-17 Thread Biddiscombe, John A.
memory use on remote nodes between t1 and t2 - where t1 and t2 are the start and stop of either a function, job or even paraview python script on the remote node? thanks JB -- John Biddiscombe,email:biddisco @.at.@ cscs.ch http://www.cscs.ch/ CSCS, Swiss National Supercom

Re: [Paraview] Specifying camera movement using points from a file

2016-04-17 Thread Biddiscombe, John A.
There is a very old branch here https://github.com/biddisco/ParaView/commits/jb-4.0-volrender with two commits that add a helix generator to the pv gui. No idea if they would still merge with master - they date back to 2013, but if someone wanted an interactive helix edit for camera path

[Paraview] xdmf + hdf5 error in Paraview

2016-03-02 Thread John Jomo
5 GB large. Does anyone know how the cause of this strange behaviour? I tried visualizing the content in visIT but got the same error. thanks in advance John. -- John Jomo M.Sc. Technische Universität München Computation in Engineering Simulation in Applied Mechanics - SAM Arcisstraße 21 80333

Re: [Paraview] Send an array from client to server

2015-09-26 Thread Biddiscombe, John A.
ues << stream.InsertArray(values, maxValues) << vtkClientServerStream::End; Utkarsh On Mon, Sep 21, 2015 at 8:40 AM, Utkarsh Ayachit mailto:utkarsh.ayac...@kitware.com>> wrote: John, That looks too convoluted. I haven't done this in a while so I'll need to refr

[Paraview] Isosurfaces with Hex elements

2015-09-20 Thread John Moore
the wrong track here... Thank you for looking, John ___ Powered by www.kitware.com Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html Please keep messages on-topic and check the ParaView Wiki at: http://paravie

Re: [Paraview] Send an array from client to server

2015-09-20 Thread Biddiscombe, John A.
Just following up so that when I’ve forgotten how to do it ... This works #define VTK_WRAPPING_CXX #include "vtkClientServerStream.h" ... // void SetSelectedGIds(int n, const int *Ids); void SetSelectedGIds(int N, int Ids[]); //BTX void SetSelectedGIds(int N, vtkClientServerStreamDataArg

Re: [Paraview] Send an array from client to server

2015-09-19 Thread Biddiscombe, John A.
to pass an int pointer with a known length from client to server, o I’d welcome any info that simplifies this. Thanks JB On 18/09/15 23:50, "ParaView on behalf of Biddiscombe, John A." wrote: >Utkarsh > >Apologies, I didn’t get chance to try this prop

Re: [Paraview] Send an array from client to server

2015-09-18 Thread Biddiscombe, John A.
etSession()->ExecuteStream(proxy->GetLocation(), stream); > >Assuming a server-side API of `void SetValues(int count, int* values);`. > >(please confirm the API, but this is pretty close to what it would look >like) > >Utkarsh > > >> On Thu, Sep 17, 2015 at 6:22

Re: [Paraview] Send an array from client to server

2015-09-17 Thread Biddiscombe, John A.
5 16:47 To: Biddiscombe, John A. Cc: paraview@paraview.org Subject: Re: [Paraview] Send an array from client to server (hit `send` prematurely, ignore previous email) How big is the array? For 100s of values, I'd say IntVectorProperty is still reasonable. Any other approach will mean that those value

[Paraview] Send an array from client to server

2015-09-17 Thread Biddiscombe, John A.
on, but the GIDs are not the same as the cell Ids, so I wanted to try a direct array method first) thanks JB -- John Biddiscombe,email:biddisco @.at.@ cscs.ch http://www.cscs.ch/ CSCS, Swiss National Supercomputing Centre | Tel: +41 (91) 610.82.07 Via Trevano 131, 69

Re: [Paraview] PCL Plugin

2015-07-14 Thread Biddiscombe, John A.
Casey I had a look at the PCL plugin and couldn’t help notice that you’ve copied some of my particle partition filtering code into the plugin, though it does not look functional as it’s not enabled in the cmake and does not include the relevant Zoltan sources or the vtkZoltanV1PartitionFilter b

[Paraview] Info about AMR datasets/structures

2015-06-10 Thread Biddiscombe, John A.
Dear list, I would like to generate some AMR data structures from custom data and filters, but I’m having trouble locating information about the format/relationships of AMR blocks. The wiki contains old outdated references to the heirarchicalbox structures and not to the overlapping and non ove

[Paraview] Full screen screenshots

2015-05-11 Thread John Moore
ide menus on my desktop, and setting the view size to 1920x1080 pushes the render view outside of my display range. Is there a way around this? Rendering in full screen mode should solve the problem, but I don't know how to activate full screen from pvpython. Is there a way to do th

Re: [Paraview] Multiple GPUs per node

2015-05-11 Thread John Moore
nf > <https://github.com/burlen/pvserver-configs/blob/master/servers/nautilus/3.10.0-x/xorg.conf> > on this system, each card has it's own device, screen, and layout. > > Hope it helps. > Burlen > > > On 05/10/2015 09:30 PM, srikanth.nage...@stfc.ac.uk wrote:

[Paraview] Multiple GPUs per node

2015-05-08 Thread John Moore
Thank you for your time! John ___ Powered by www.kitware.com Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaVie

Re: [Paraview] MPI-aware reader plugin only has rank 0

2015-04-14 Thread Biddiscombe, John A.
rank 0 JB -Original Message- From: Schlottke, Michael [mailto:m.schlot...@aia.rwth-aachen.de] Sent: 14 April 2015 09:09 To: Biddiscombe, John A. Cc: Utkarsh Ayachit; ParaView Subject: Re: [Paraview] MPI-aware reader plugin only has rank 0 > are you sure you don't mean that only printf

Re: [Paraview] MPI-aware reader plugin only has rank 0

2015-04-13 Thread Biddiscombe, John A.
When you said " rank/size: 0/4 However, all I ever get is the last line" are you sure you don't mean that only printf/std:::cout from rank 0 is visible? but I actual fact the other pvservers are fine. Create a sphere and check if it has N pieces. JB -Original Message- From: ParaView

Re: [Paraview] Help with LoadingState and python scripting

2015-02-18 Thread John Moore
t pop up on my local machine whenever the python script (run on my local machine) needs to take s screenshot. Thanks, John On Wed, Feb 18, 2015 at 6:56 PM, John Moore wrote: > Sorry about the pre-mature end to the last message. Apparently in gmail > Tab takes you directly to the send button.

Re: [Paraview] Help with LoadingState and python scripting

2015-02-18 Thread John Moore
ata is deleted at each time step, otherwise the memory requirement would be huge. Any suggestions would be greatly appreciated. Thank you for your time! John On Wed, Feb 18, 2015 at 6:41 PM, John Moore wrote: > So, this is what I would like to do, but am new to ParaView and can't

[Paraview] Help with LoadingState and python scripting

2015-02-18 Thread John Moore
So, this is what I would like to do, but am new to ParaView and can't figure out how to proceed. Any pointers would be greatly appreciated. I have unsteady data that that represents high-order finite elements. In order to visualize the high order elements, I subdivide them Nref times, and write th

Re: [Paraview] Compile error: unknown type name ‘sigjmp_buf’

2015-02-18 Thread John Moore
H5_HAVE_SETJMP_H:INTERNAL=1 I've tried to compile both with and without having HDF5 installed on my system, and both methods fail. I haven't tried -DVTK_USE_SYSTEM_HDF5=ON yet because I would like to be able to use the H5 included with VTK, if possible. Thanks, John On Wed, Feb 18, 2015 at 11:02 AM, Ben Boec

Re: [Paraview] Error cross-compiling Catalyst on BG/Q

2015-02-17 Thread Biddiscombe, John A.
a local expert and he says, "if you want any optimization on the compute nodes you should use the cross compilers. Likewise, if you use optimization on your frontend compile, you won't be able to run on the compute nodes. They're not fully binary compatible and they do not use

Re: [Paraview] Error cross-compiling Catalyst on BG/Q

2015-02-17 Thread Biddiscombe, John A.
des you should use the cross compilers. Likewise, if you use optimization on your frontend compile, you won't be able to run on the compute nodes. They're not fully binary compatible and they do not use the same OS. So your mileage will vary with this approach.” — Rich On Feb 12, 2015, at 10:

[Paraview] Compile error: unknown type name ‘sigjmp_buf’

2015-02-17 Thread John Moore
I get the following error when compiling on Ubuntu 14.04 /home/john/local/ParaView/4.3.1/ParaView-v4.3.1-source/VTK/ThirdParty/hdf5/vtkhdf5/src/H5detect.c:149:1: error: unknown type name ‘sigjmp_buf’ static H5JMP_BUF jbuf_g; I've installed HDF5 and its development tools. Any idea how I ca

Re: [Paraview] Error cross-compiling Catalyst on BG/Q

2015-02-12 Thread Biddiscombe, John A.
Rich On the BGQ, the compute nodes and login nodes are binary compatible, so you shouldn’t need to bother with most of the cross compiling stuff. the only thing to watch out for is the MPI and since vtkParseOGLExt and vtkWrapPython etc don’t touch that, you ought to be ok compiling _as if_ you

Re: [Paraview] Writer plugin?

2015-01-29 Thread Biddiscombe, John A.
David I used to make my writers the same as filters and even allow them to shallow copy their input to the output. Then in paraview they can appear in the filters menu and can be inserted in the middle of a pipeline and each time a render is activated, the writer would be triggered. (I used it

Re: [Paraview] Calculating the distance between two surfaces as a function of time during large deformation process

2014-12-24 Thread Biddiscombe, John A.
ile with a Programmable Filter that >exposes the vtkDistancePolyDataFilter. It could also be exposed as an >XML plugin. > >Cheers, >Cory > >On Tue, Dec 23, 2014 at 6:20 PM, Biddiscombe, John A. >wrote: >> The way I did this was to use one surface as a “source” - fire rays from >>

Re: [Paraview] Calculating the distance between two surfaces as a function of time during large deformation process

2014-12-23 Thread Biddiscombe, John A.
The way I did this was to use one surface as a “source” - fire rays from this surface along the surface normal until they hit the “target” and return the distance. Then use the distances for every source node as a new field which is output. One requires ideally a source mesh with quite dense points

Re: [Paraview] how to supprot the vortex detection and the vortex core line

2014-12-02 Thread Biddiscombe, John A.
we implemented vortex cores in paraview many years ago, but after searching I could not find the code http://www.inf.ethz.ch/personal/peikert/SciVis/research/CTI-FinalReport.pdf is the/one reference. Filip Sadlo was the main author and might have a copy somewhere. I must have it in one of my arc

[Paraview] Saving pipeline object data as a .csv

2014-11-03 Thread John Mangeri
rent geometries and materials blocks that I need to script; these end up having different total mesh elements so the k range will not be the same and the blank files also differ. Thanks John Mangeri Univ. Connecticut ___ Powered by www.kitware.com Visi

Re: [Paraview] Filter to keep points, dropping topology

2014-10-22 Thread Biddiscombe, John A.
t's going to be more complicated if you're >> starting from data types that have implicit points. >> >> >> On 10/22/2014 07:52 AM, Biddiscombe, John A. wrote: >>> Output->SetPoints(input->GetPoints()); >>> >>> Or >>>

Re: [Paraview] Filter to keep points, dropping topology

2014-10-22 Thread Biddiscombe, John A.
Output->SetPoints(input->GetPoints()); Or Output->CopyStructure(input); Output->SetCells(NULL) Then copy point field data etc On 22/10/14 16:19, "B.W.H. van Beest" wrote: >Hello, > >I need a filter that only keeps the 3D points of a certain source (e.g. >coming from an stl file). >The topol

Re: [Paraview] Catalyst question

2014-10-17 Thread Biddiscombe, John A.
Andy >I'll be at SC14 and I'd be interested in seeing your demo. Are the details of >when and where ready yet? At the CSCS booth, we will have a display of the simulation running on our cray. Hopefully it’ll be running on and off for a significant part of the week and we wanted to display the li

Re: [Paraview] Catalyst question

2014-10-16 Thread Biddiscombe, John A.
hen it should be possible might try this myself if I have a moment spare. thanks again JB From: Dan Lipsa [mailto:dan.li...@kitware.com] Sent: 16 October 2014 16:32 To: Biddiscombe, John A. Cc: Andy Bauer; paraview@paraview.org Subject: Re: [Paraview] Catalyst question Hi John, I had im

Re: [Paraview] Catalyst question

2014-10-16 Thread Biddiscombe, John A.
2014 15:34 To: Biddiscombe, John A. Cc: paraview@paraview.org Subject: Re: [Paraview] Catalyst question Hi John, This live capability is now available and recently has been cleaned up quite a bit. There are still a couple more small changes that are waiting a code review process before they go

Re: [Paraview] ParaView 4.2.0 client/server execution error on SGI UV System (UNCLASSIFIED)

2014-10-10 Thread Biddiscombe, John A.
The client has created the representation glyph3d, but the server hasn’t got it compiled in by the looks of it, so the create representation fails. Does it get skipped when using osmesa (and hence doesn’t exist on the server)? I’m not certain of this, but it happens all the time with the same erro

Re: [Paraview] [EXTERNAL] displaying simulation time rather than time step

2014-10-09 Thread Biddiscombe, John A.
A similar question came up a few weeks ago and I posted this link https://hpcforge.org/plugins/scmgit/cgi-bin/gitweb.cgi?p=pv-echam/pv-echam.git;a=blob;f=vtkJulianDayToTextConvertor.h;h=490320de30539ed88527ca79c53e2acc17264bf5;hb=HEAD To a class which takes climate simulation time stamps and conver

Re: [Paraview] Point swarm with one cell

2014-10-09 Thread Biddiscombe, John A.
It's because most of the filters which operate on 'cells' don't really handle the multi-vertex cell type in the way you'd like. Converting the data to 32768 cells with one point each is the solution. you used to be able to use MaskPoints filter to do that, but the singlecellpervertex function is

[Paraview] How to call a specifc data set from a multi-block ExodusII data set?

2014-08-28 Thread John Mangeri
ecent call last): File "", line 1, in NameError: name 'q' is not defined What is going on here? Thanks John ___ Powered by www.kitware.com Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html

Re: [Paraview] Catalyst question

2014-08-26 Thread Biddiscombe, John A.
: Biddiscombe, John A. Cc: paraview@paraview.org Subject: Re: [Paraview] Catalyst question Hi John, This live capability is now available and recently has been cleaned up quite a bit. There are still a couple more small changes that are waiting a code review process before they go into the master branch

[Paraview] Catalyst question

2014-08-26 Thread Biddiscombe, John A.
s JB -- John Biddiscombe,email:biddisco @.at.@ cscs.ch http://www.cscs.ch/ CSCS, Swiss National Supercomputing Centre | Tel: +41 (91) 610.82.07 Via Trevano 131, 6900 Lugano, Switzerland | Fax: +41 (91) 610.82.82 ___ Power

Re: [Paraview] Building Piston

2014-07-18 Thread Biddiscombe, John A.
https://github.com/biddisco/PISTON/tree/pv-cuda Is a fork I made of piston some time back where I fixed some thrust related problems I had – mostly using piston with newer versions of cuda and newer thrust versions than it was originally intended for. Warning : I made a lot of changes to data ty

Re: [Paraview] Using JOIN to load images from Many HDF files.

2014-07-11 Thread John Hammonds
but different HDF format (can't see to find the link at the moment). John On 7/11/2014 2:42 PM, Marcus D. Hanwell wrote: On Fri, Jul 11, 2014 at 10:51 AM, John Hammonds wrote: I tried posting this to the XDMF mailing list and have received no response. Hoping someone here can help... I h

Re: [Paraview] Resampling to a uniform grid

2014-07-11 Thread Biddiscombe, John A.
I do this by using the pv-zoltan plugin mesh redistribution filter, which distributes meshes in parallel, adds ghost cells as needed and also (and importantly here) bounding box information to the extent translator (vtkBoundsExtentTranslator). Then in the pv-meshless plugin I have a resampling

Re: [Paraview] Issue with ParaView rendering

2014-07-08 Thread John Mangeri
to show an initial condition which gave time stamps of 0 AND 1. I was looking at 0 instead of 1 without realizing the solution was on the other time stamp. I'd like to close this thread. How do I go about doing so? John On Tue, Jul 8, 2014 at 2:34 AM, Dieter Froning wrote: > dear John,

[Paraview] Issue with ParaView rendering

2014-07-07 Thread John Mangeri
Mag variable to disp_X the problem ceases for File_2 -Other unrelated files are giving me the same error but the data type data range is listed as double [.05,.05] Also I'm sure all of my settings are set to DEFAULT since I haven't changed them at all. Thanks for the help John M ___

Re: [Paraview] Particle tracer filter: trajectories integrator

2014-06-16 Thread Biddiscombe, John A.
’ up by kitware a few times and various bits moved from one place to another and it’s possible the defaults were modified. JB From: Enrico Calore [mailto:enryka...@gmail.com] Sent: 16 June 2014 23:00 To: Biddiscombe, John A. Cc: paraview@paraview.org Subject: Re: [Paraview] Particle tracer filter

Re: [Paraview] Particle tracer filter: trajectories integrator

2014-06-15 Thread Biddiscombe, John A.
The integration can be set, but by default it should use vtkRungeKutta4 if memory serves me correctly JB From: Enrico Calore mailto:enryka...@gmail.com>> Date: Sunday 15 June 2014 20:16 To: "paraview@paraview.org" mailto:paraview@paraview.org>> Subject: [Paraview]

Re: [Paraview] [EXTERNAL] Re: FW: Paraview Legend/Colorbar Question

2014-06-12 Thread Biddiscombe, John A.
Alan I have not looked at the discreet colour legends myself, but I would work hard to avoid using the clip filters to separate out the good/bad data. If I had to do it, I’d replace the scalars to colours painter with one that stuffed in the colour I wanted in the out of bounds areas. Actually,

Re: [Paraview] macbook paraview problem

2014-05-12 Thread Biddiscombe, John A.
to >the foreground. But if I launch it with "open /path/to/paraview.app" (or >a double-click on the App icon) then it opens in the foreground. Does >that help? > > -k. > >On 2014-05-12 at 06:26, Biddiscombe, John A. wrote: >> Hello all, >> >>

Re: [Paraview] macbook paraview problem

2014-05-12 Thread Biddiscombe, John A.
Ken, Thanks. Works perfectly. JB From: Moreland, Kenneth [mailto:kmo...@sandia.gov] Sent: 12 May 2014 16:17 To: Biddiscombe, John A.; paraview@paraview.org Subject: Re: [Paraview] macbook paraview problem Try executing it with "open /Users/biddisco/build/pv4/bin/paraview.app".

[Paraview] macbook paraview problem

2014-05-12 Thread Biddiscombe, John A.
d moving focus back to paraview (But that is quite annoying) Is there some key magic step that is required for applications to make the menus appear on macs (or just an easier way)? thanks JB -- John Biddiscombe,email:biddisco @.at.@ cscs.ch http://www.cscs.ch/ CSCS,

Re: [Paraview] PointSprite with Recent Intel HD Graphics

2014-02-10 Thread Biddiscombe, John A.
ped and contributed by // // Copyright (c) CSCS - Swiss National Supercomputing Centre // EDF - Electricite de France // // John Biddiscombe, Ugo Varetto (CSCS) // Stephane Ploix (EDF) // // uniform vec2 RadiusSpan; attribute float Radius; float GetRadius() { return RadiusSpan.x

[Paraview] Looking for paper on viz cluster usage

2014-01-27 Thread Biddiscombe, John A.
erved, hey may also be doing nothing) Has anyone ever published statistics of usage? if so please send me links. Many Thanks JB -- John Biddiscombe,email:biddisco @.at.@ cscs.ch http://www.cscs.ch/ CSCS, Swiss National Supercomputing Centre | Tel: +41 (91) 610.82.0

Re: [Paraview] ParticleTracer particle lifetime

2014-01-14 Thread Biddiscombe, John A.
> > > >Note that if you jump around in time, the particle filter can be very >slow specially with time dependent data. It has to regenerate the >particle paths for all of the times in between if you do that, which >means loading a lot of data from disk. It should be relatively fast >when animating

Re: [Paraview] New Transfer function editing capabilities for ParaView

2013-12-17 Thread Biddiscombe, John A.
Biddiscombe, John A. Sent: 17 December 2013 10:45 To: paraview-develop...@paraview.org; VTK Developers; ParaView; VTK Users Subject: [Paraview] New Transfer function editing capabilities for ParaView I am looking for reviewers/testers for a new feature branch for ParaView and VTK which introduces

[Paraview] New Transfer function editing capabilities for ParaView

2013-12-17 Thread Biddiscombe, John A.
cientific visualization, if you have anything suitable please contact him. Yours JB + Nicholas -- John Biddiscombe,email:biddisco @.at.@ cscs.ch http://www.cscs.ch/ CSCS, Swiss National Supercomputing Centre | Tel: +41 (91) 610.82.07 Via Trevano 131, 6900 Lugano, Swit

[Paraview] VTK_BIQUADRATIC_PYRAMID?

2013-12-04 Thread John Peterson
element. Are there any plans to add such an element, and if not, is it a task that a complete VTK novice could even hope to undertake? Thanks, John ___ Powered by www.kitware.com Visit other Kitware open-source projects at http://www.kitware.com

Re: [Paraview] XDMF and AMR grids

2013-11-25 Thread John Haiducek
Thanks, guys! John On Nov 25, 2013, at 4:59 PM, David E DeMarle wrote: > The new version won't produce AMR at this point either, just vtkMultiBlock of > vtkUniformGrid. > In that case George's suggestion about ginning up a blanking array is the way > to go. > &

Re: [Paraview] XDMF and AMR grids

2013-11-25 Thread John Haiducek
On Nov 25, 2013, at 11:25 AM, John Haiducek wrote: > Is there a way to store an AMR grid in XDMF format so that Paraview > understands it? There was a post on this list in 2011 about doing this using > a SubSet grid type in the XDMF file (titled “SubSet grid type in Xdmf”). One

[Paraview] XDMF and AMR grids

2013-11-25 Thread John Haiducek
turn off the lower resolution levels. Is that still the recommended method? John Haiducek ___ Powered by www.kitware.com Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html Please keep messages on-topic and

Re: [Paraview] installing pv-meshless plugin for ParaView

2013-11-13 Thread Biddiscombe, John A.
Yaroslav I do not support the pv-meshless code any more, there are some branches in the git repo which work with pv4.x but they are all in various stages of experimentation. I am not currently working on particle based simulations so don’t have the time to look after the code. Building paraview

[Paraview] howto : Build paraview (git master) on OSX 10.9

2013-11-07 Thread Biddiscombe, John A.
mpiexec –n 2 bin/pvserver and all is correct, I can render a sphere and see each process doing the right thing. HTH JB -- John Biddiscombe,email:biddisco @.at.@ cscs.ch http://www.cscs.ch/ CSCS, Swiss National Supercomputing Centre | Tel: +41 (91) 610.82.07 Via Tre

[Paraview] script for kitware code style formatting

2013-10-23 Thread Biddiscombe, John A.
ied in one branch and put them to the correct (or at least close) kitware code style? script should replace tabs with spaces, indent correctly, and put {} brackets on their own line. Does anything like that exist? thanks JB -- John Biddiscombe,email:biddisco @.at.@ cs

Re: [Paraview] StreamTracer streamlines not terminating reliably at exterior boundary

2013-09-13 Thread Biddiscombe, John A.
Looks as though the parts outside the box are all linear. what I suspect is happening is that the findCell routine is returning true off the edge of the dataset and the last velocity is being reused even though the internal interpolation ought to fail. To fix it one would have to check the toler

Re: [Paraview] ParaView 4.0.1 Opacity performance (UNCLASSIFIED)

2013-09-12 Thread Biddiscombe, John A.
to write a long email to describe the work I've been doing on transparency for our meshes but There is a section in this paper "Juan Hernando, John Biddiscombe, Bidur Bohara, Stefan Eilemann, Felix Schürmann: Practical Parallel Rendering of Detailed Neuron Simulations. EG

Re: [Paraview] [Xdmf] Seeking help with display hdf5 file in paraview using xdmf

2013-09-06 Thread Biddiscombe, John A.
you need to use two separate grid entries, have a look at this for example, it contains 2 grids inside a spatial grid collection -6E6 -6E6 -6E6 10 10 10

Re: [Paraview] PV 4.01 How to get screenshot with menu

2013-08-22 Thread Biddiscombe, John A.
printscreen key on keyboard? (or Alt+Printscreen) > -Original Message- > From: paraview-boun...@paraview.org [mailto:paraview- > boun...@paraview.org] On Behalf Of Stephen Wornom > Sent: 22 August 2013 10:50 > To: ParaView list > Subject: [Paraview] PV 4.01 How to get screenshot with menu

Re: [Paraview] Coprocessing with accelerators

2013-08-20 Thread Biddiscombe, John A.
> But yes Mark you are right. As it stands there will be a round trip in between the simulation and vis stages. We will have to extend Catalyst with the ability to create a vtkPistonDataObject that refers to the data already on the GPU in order to avoid it. > Since piston is a very thin wrapper

Re: [Paraview] Blog Post: Contours and Color Maps in ParaView

2013-07-31 Thread Biddiscombe, John A.
fab. well done. I'll use this. JB From: paraview-boun...@paraview.org [mailto:paraview-boun...@paraview.org] On Behalf Of Utkarsh Ayachit Sent: 31 July 2013 22:39 To: ParaView Subject: [Paraview] Blog Post: Contours and Color Maps in ParaView If you're looking to see how the updates to Color Ma

Re: [Paraview] resume python script from last position

2013-07-26 Thread Biddiscombe, John A.
rom: Favre Jean Sent: 26 July 2013 10:05 To: Biddiscombe, John A.; paraview@paraview.org Subject: RE: resume python script from last position you may use for example time, and replacing space with underscore. import time view.WriteImage(format("pic_" + time.asctime().replace(" ",

[Paraview] resume python script from last position

2013-07-25 Thread Biddiscombe, John A.
l find the right place to restart from that I can use. My python skills are learner level, so I'm hoping some does this regularly and can send a snippet faster than I can work it out myself. thanks JB -- John Biddiscombe,email:biddisco @.at.@ cscs.ch http://www.cscs.

[Paraview] vtkLinearSelector not available

2013-07-22 Thread John Fraser
Hello,   I was wondering if there was any reason that vtkLinearSelector is not available from the Python programmable filter?  I've tried using the following code to access it:  from paraview.vtk import vtkFiltersSelection v = vtkFiltersSelection.vtkLinearSelector()   Having a quick look at the s

[Paraview] Programmable filter: Use of VTK filter classes

2013-07-15 Thread John Fraser
Hello,   I'm using Paraview on 4.0.1.  I was under the impression that it would be possible to use some of the many VTK filters from a Python programmable filter, however I seem to only be able to instansiate some of the filters, for others I get the message:   Traceback (most recent call last):

[Paraview] Programmable filter: Clip scale properties

2013-07-11 Thread John Fraser
Hello, Further to my last message, what I'm trying to do is access the "scale" parameters that are visible on the Paraview properties window of the clip filter in a Python programmable script.  Is it possible to do this?  I have already been able to access the bounds but would like access to th

[Paraview] Programmable filter: Get clip box size

2013-07-11 Thread John Fraser
owever how do I access the actual size of the clip box itself?  I tried printing out curInput and cannot see any information about the size of the box.  Do I have to access this using GetInformation or some other method? Thanks, John ___

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