[petsc-dev] Building a serial version of petsc with sundials, hypre, scalapack, etc

2011-12-19 Thread Barry Smith
On Dec 19, 2011, at 12:06 AM, Dave Nystrom wrote: > Several of the external packages that have been interfaced with petsc require > mpi. Is there a way to build a serial version of petsc with these packages > and use stub routines for mpi? MUMPS can be built without MPI using petsc-dev but a

[petsc-dev] Building a serial version of petsc with sundials, hypre, scalapack, etc

2011-12-19 Thread Satish Balay
On Mon, 19 Dec 2011, Barry Smith wrote: > > On Dec 19, 2011, at 12:06 AM, Dave Nystrom wrote: > > > Several of the external packages that have been interfaced with petsc > > require > > mpi. Is there a way to build a serial version of petsc with these packages > > and use stub routines for mpi

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2011-12-19 Thread Matthew Knepley
before they begin their experiments is infinitely more interesting than any results to which their experiments lead. -- Norbert Wiener -- next part -- An HTML attachment was scrubbed... URL: <http://lists.mcs.anl.gov/pipermail/petsc-dev/attachments/20111219/4df3e

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2011-12-19 Thread Jed Brown
> consecutive integers are handled well. > > So far, I cannot find any free implementations. > Do you have a reference showing that the constants are decent? -- next part -- An HTML attachment was scrubbed... URL: <http://lists.mcs.anl.gov/pipermail/petsc-dev/attachments/20111219/1eebd295/attachment.html>

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2011-12-19 Thread Matthew Knepley
heir experiments lead. -- Norbert Wiener -- next part -- An HTML attachment was scrubbed... URL: <http://lists.mcs.anl.gov/pipermail/petsc-dev/attachments/20111219/5786fd2a/attachment.html>

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2011-12-19 Thread Barry Smith
On Dec 19, 2011, at 9:30 PM, Matthew Knepley wrote: > I looked at the new checkins for fast MatMatSym. It looks to me like you want > a data > structure that has > > a) O(N) space, where N is the number of entries > > b) fast insert > > c) fast traversal > > It seems like the best dat

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2011-12-19 Thread Barry Smith
Note that this same operation (merging collections of sorted integers) is also needed for factorization so having a solid toolkit of different algorithms that perform this well for different size problems and different levels of sparsity would be a useful thing in PETSc. Barry On Dec 1