fixed and pushed. Hong On Fri, Mar 2, 2012 at 4:54 PM, Barry Smith <bsmith at mcs.anl.gov> wrote:
> > Hong, > > MatMerge_Seq() is not doing preallocation nor setting the flag that > allows improper preallocation > > -*- mode: compilation; default-directory: > "/Users/barrysmith/Src/petsc-dev/src/mat/examples/tests/" -*- > Compilation started at Fri Mar 2 16:52:06 > > make PETSC_DIR=/Users/barrysmith/Src/petsc-dev PETSC_ARCH=arch-gnu runex95 > [0]PETSC ERROR: --------------------- Error Message > ------------------------------------ > [0]PETSC ERROR: Argument out of range! > [0]PETSC ERROR: New nonzero at (0,0) caused a malloc! > [0]PETSC ERROR: > ------------------------------------------------------------------------ > [0]PETSC ERROR: Petsc Development HG revision: > d35fa29f81218e6e5376faf87f3925c16b47cb76 HG Date: Thu Mar 01 19:13:43 2012 > -0600 > [0]PETSC ERROR: See docs/changes/index.html for recent updates. > [0]PETSC ERROR: See docs/faq.html for hints about trouble shooting. > [0]PETSC ERROR: See docs/index.html for manual pages. > [0]PETSC ERROR: > ------------------------------------------------------------------------ > [0]PETSC ERROR: ./ex95 on a arch-gnu named > anlextwls003-010.wl.anl-external.org by barrysmith Fri Mar 2 16:52:06 > 2012 > [0]PETSC ERROR: Libraries linked from > /Users/barrysmith/Src/petsc-dev/arch-gnu/lib > [0]PETSC ERROR: Configure run at Thu Mar 1 20:56:05 2012 > [0]PETSC ERROR: Configure options --download-blacs --download-fftw > --download-hypre --download-metis --download-mpich --download-mumps > --download-parmetis --download-ptscotch --download-scalapack > --download-superlu --download-superlu_dist --download-yaml > --with-shared-libraries PETSC_ARCH=arch-gnu > [0]PETSC ERROR: > ------------------------------------------------------------------------ > [0]PETSC ERROR: MatSetValues_MPIAIJ() line 506 in > /Users/barrysmith/Src/petsc-dev/src/mat/impls/aij/mpi/mpiaij.c > [0]PETSC ERROR: [1]PETSC ERROR: --------------------- Error Message > ------------------------------------ > [1]PETSC ERROR: Argument out of range! > [1]PETSC ERROR: New nonzero at (0,0) caused a malloc! > [1]PETSC ERROR: > ------------------------------------------------------------------------ > [1]PETSC ERROR: Petsc Development HG revision: > d35fa29f81218e6e5376faf87f3925c16b47cb76 HG Date: Thu Mar 01 19:13:43 2012 > -0600 > [1]PETSC ERROR: See docs/changes/index.html for recent updates. > [1]PETSC ERROR: See docs/faq.html for hints about trouble shooting. > [1]PETSC ERROR: See docs/index.html for manual pages. > [1]PETSC ERROR: > ------------------------------------------------------------------------ > [1]PETSC ERROR: ./ex95 on a arch-gnu named > anlextwls003-010.wl.anl-external.org by barrysmith Fri Mar 2 16:52:06 > 2012 > [1]PETSC ERROR: Libraries linked from > /Users/barrysmith/Src/petsc-dev/arch-gnu/lib > [1]PETSC ERROR: Configure run at Thu Mar 1 20:56:05 2012 > [1]PETSC ERROR: Configure options --download-blacs --download-fftw > --download-hypre --download-metis --download-mpich --download-mumps > --download-parmetis --download-ptscotch --download-scalapack > --download-superlu --download-superlu_dist --download-yaml > --with-shared-libraries PETSC_ARCH=arch-gnu > [1]PETSC ERROR: > ------------------------------------------------------------------------ > [1]PETSC ERROR: MatSetValues_MPIAIJ() line 506 in > /Users/barrysmith/Src/petsc-dev/src/mat/impls/aij/mpi/mpiaij.c > [1]PETSC ERROR: MatSetValues() line 1141 in > /Users/barrysmith/Src/petsc-dev/src/mat/interface/matrix.c > [1]PETSC ERROR: MatMerge_SeqsToMPINumeric() line 4548 in > /Users/barrysmith/Src/petsc-dev/src/mat/impls/aij/mpi/mpiaij.c > [1]PETSC ERROR: MatMerge_SeqsToMPI() line 4848 in > /Users/barrysmith/Src/petsc-dev/src/mat/impls/aij/mpi/mpiaij.c > [1]PETSC ERROR: main() line 41 in src/mat/examples/tests/ex95.c > application called MPI_Abort(MPI_COMM_WORLD, 63) - process 1 > [cli_1]: aborting job: > application called MPI_Abort(MPI_COMM_WORLD, 63) - process 1 > [2]PETSC ERROR: --------------------- Error Message > ------------------------------------ > [2]PETSC ERROR: Argument out of range! > [2]PETSC ERROR: New nonzero at (0,0) caused a malloc! > [2]PETSC ERROR: > ------------------------------------------------------------------------ > [2]PETSC ERROR: Petsc Development HG revision: > d35fa29f81218e6e5376faf87f3925c16b47cb76 HG Date: Thu Mar 01 19:13:43 2012 > -0600 > [2]PETSC ERROR: See docs/changes/index.html for recent updates. > [2]PETSC ERROR: See docs/faq.html for hints about trouble shooting. > [2]PETSC ERROR: See docs/index.html for manual pages. > [2]PETSC ERROR: > ------------------------------------------------------------------------ > [2]PETSC ERROR: ./ex95 on a arch-gnu named > anlextwls003-010.wl.anl-external.org by barrysmith Fri Mar 2 16:52:06 > 2012 > [2]PETSC ERROR: Libraries linked from > /Users/barrysmith/Src/petsc-dev/arch-gnu/lib > [2]PETSC ERROR: Configure run at Thu Mar 1 20:56:05 2012 > [2]PETSC ERROR: Configure options --download-blacs --download-fftw > --download-hypre --download-metis --download-mpich --download-mumps > --download-parmetis --download-ptscotch --download-scalapack > --download-superlu --download-superlu_dist --download-yaml > --with-shared-libraries PETSC_ARCH=arch-gnu > [2]PETSC ERROR: > ------------------------------------------------------------------------ > [2]PETSC ERROR: MatSetValues_MPIAIJ() line 506 in > /Users/barrysmith/Src/petsc-dev/src/mat/impls/aij/mpi/mpiaij.c > [2]PETSC ERROR: MatSetValues() line 1141 in > /Users/barrysmith/Src/petsc-dev/src/mat/interface/matrix.c > [2]PETSC ERROR: MatMerge_SeqsToMPINumeric() line 4548 in > /Users/barrysmith/Src/petsc-dev/src/mat/impls/aij/mpi/mpiaij.c > [2]PETSC ERROR: MatMerge_Seq > Compilation finished at Fri Mar 2 16:52:06 > > > -------------- next part -------------- An HTML attachment was scrubbed... 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