[petsc-dev] Bad fortran interface generations

2012-09-18 Thread Stefano Zampini
uot;, > > > line 25.8: 1513-085 (S) Improper END statement specified. This END > > > statement will be matched with the program unit or procedure named > _main. > > > ** _main === End of Compilation 138 === > > > .. > > > > > > > > > > > > > > > > -- > > Stefano > > -- Stefano -- next part -- An HTML attachment was scrubbed... URL: <http://lists.mcs.anl.gov/pipermail/petsc-dev/attachments/20120918/d6b7cae5/attachment.html>

[petsc-dev] pretty printing PETSc source code

2012-09-18 Thread Barry Smith
On Sep 18, 2012, at 10:21 PM, Karl Rupp wrote: > Hi, > > > Yes, I have dreamed for many years that upon committing files to > > petsc-dev it would automatically trigger appropriate formatting tools so > > people cannot commit/push badly formatted source code. Unfortunately the > > llvm boy

[petsc-dev] pretty printing PETSc source code

2012-09-18 Thread Karl Rupp
Hi, > Yes, I have dreamed for many years that upon committing files to petsc-dev it would automatically trigger appropriate formatting tools so people cannot commit/push badly formatted source code. Unfortunately the llvm boys and girls have let me down and I still cannot find a tool better

[petsc-dev] pretty printing PETSc source code

2012-09-18 Thread Barry Smith
As those who watch the petsc-dev RSS feed know (by the way, get a life; surely George Takei's Facebook feeds are more enlightening ) I have been monkeying with using uncrustify for pretty printing PETSc source code and am tempted to start using it on PETSc (yes, I am anal about source code f

[petsc-dev] KSP automatic reordering

2012-09-18 Thread Barry Smith
On Sep 18, 2012, at 9:17 PM, Jed Brown wrote: > On Tue, Sep 18, 2012 at 9:15 PM, Barry Smith wrote: > I propose we provide a new interface > > KSPSolveMatrixMarket(filename) that purportedly reads in a matrix > market matrix and solves it but in fact just returns a (small) time lin

[petsc-dev] KSP automatic reordering

2012-09-18 Thread Jed Brown
the file. Saves everyone a lot of > wasted effort. > Perfect. I always miss the simple, elegant solutions. -- next part -- An HTML attachment was scrubbed... URL: <http://lists.mcs.anl.gov/pipermail/petsc-dev/attachments/20120918/2f16cd67/attachment.html>

[petsc-dev] KSP automatic reordering

2012-09-18 Thread Barry Smith
On Sep 18, 2012, at 9:02 PM, Jed Brown wrote: > On Tue, Sep 18, 2012 at 8:58 PM, Matthew Knepley wrote: > Of course, I forgot EVERYTHING goes in the DM. Once the DM computes the > ordering, the > DMLocalToGlobal is altered and we are done. > > If they had a DM, we wouldn't be having this conv

[petsc-dev] KSP automatic reordering

2012-09-18 Thread Jed Brown
w, but should perform basically the same. -- next part -- An HTML attachment was scrubbed... URL: <http://lists.mcs.anl.gov/pipermail/petsc-dev/attachments/20120918/b1d2e90f/attachment.html>

[petsc-dev] KSP automatic reordering

2012-09-18 Thread Barry Smith
On Sep 18, 2012, at 9:07 PM, Jed Brown wrote: > On Tue, Sep 18, 2012 at 8:59 PM, Barry Smith wrote: > The problem is that users won't fix their code to use the correct ordering; > they'll just have it reorder after it is made (since people are lazy), but of > course this is true regardless

[petsc-dev] KSP automatic reordering

2012-09-18 Thread Jed Brown
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[petsc-dev] KSP automatic reordering

2012-09-18 Thread Jed Brown
his utility is to make the Matrix Market benchmark results more realistic. -- next part -- An HTML attachment was scrubbed... URL: <http://lists.mcs.anl.gov/pipermail/petsc-dev/attachments/20120918/28b12035/attachment.html>

[petsc-dev] KSP automatic reordering

2012-09-18 Thread Barry Smith
On Sep 18, 2012, at 8:54 PM, Jed Brown wrote: > On Tue, Sep 18, 2012 at 8:45 PM, Matthew Knepley wrote: > But it is nasty because it changes the convergence tests, the monitor > routines (they report the residual norms in the scale system not the > original). Also, does it unscale the matrix

[petsc-dev] KSP automatic reordering

2012-09-18 Thread Matthew Knepley
ing, the DMLocalToGlobal is altered and we are done. Matt -- What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. -- Norbert Wiener -- next part -- An HTML attachment was scrubbed... URL: <http://lists.mcs.anl.gov/pipermail/petsc-dev/attachments/20120918/7d0e88c1/attachment-0001.html>

[petsc-dev] KSP automatic reordering

2012-09-18 Thread Jed Brown
nzero pattern already. We can use an option to compute a > fill-reducing ordering > and either permute it directly, or just use the permutations on in and > out. This insulates it from > the solver completely. > At what point is the vector reordered? -- next part -- An HTML attachment was scrubbed... URL: <http://lists.mcs.anl.gov/pipermail/petsc-dev/attachments/20120918/93393420/attachment.html>

[petsc-dev] KSP automatic reordering

2012-09-18 Thread Matthew Knepley
pathcu -c foo.cu # CUDA (Bugs found should be fixed quickly, but > expect bugs - Thrust and CuSP testing also in progress) > > > pathcc/f90 -hmpp # OpenHMPP > > > pathcc/f90 -openacc # OpenACC and the flag will be changed to -acc soon > > > > > > For more details, documentation and or bug reports please email me > directly. > > > > > > Cheers, > > > > > > > > > Christopher > > > > > > > > > > > > -- What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. -- Norbert Wiener -- next part -- An HTML attachment was scrubbed... URL: <http://lists.mcs.anl.gov/pipermail/petsc-dev/attachments/20120918/0ed034d6/attachment.html>

[petsc-dev] Bad fortran interface generations

2012-09-18 Thread Stefano Zampini
with the program unit or procedure named _main. > > ** _main === End of Compilation 138 === > > .. > > > > > > -- Stefano -- next part -- An HTML attachment was scrubbed... URL: <http://lists.mcs.anl.gov/pipermail/petsc-dev/attachments/20120918/666cb772/attachment.html>

[petsc-dev] KSP automatic reordering

2012-09-18 Thread Barry Smith
On Sep 18, 2012, at 8:09 PM, Jed Brown wrote: > We should make it brain-dead simple for KSP to reorder internally and run the > solve in a low-bandwidth ordering. I've always had very difficult philosophical issues with doing this. It messes up the layering of KSP outside of the PC/matr

[petsc-dev] OT: Testers needed for PathScale ENZO 2012

2012-09-18 Thread Jed Brown
; pathcc/f90 -hmpp # OpenHMPP > > pathcc/f90 -openacc # OpenACC and the flag will be changed to -acc soon > > > > For more details, documentation and or bug reports please email me > directly. > > > > Cheers, > > > > > > Christopher > > > > > > -- next part -- An HTML attachment was scrubbed... URL: <http://lists.mcs.anl.gov/pipermail/petsc-dev/attachments/20120918/132703f9/attachment-0001.html>

[petsc-dev] OT: Testers needed for PathScale ENZO 2012

2012-09-18 Thread Barry Smith
Good paper, http://www.epcc.ed.ac.uk/wp-content/uploads/2011/11/PramodKumbhar.pdf, worth reading On Sep 18, 2012, at 7:46 PM, C. Bergstr?m wrote: > > Hi > > I'm hoping someone with some spare cycles and patience is willing to help > test a nightly ENZO build with petsc. > > Here's th

[petsc-dev] PCBDDCSetNullSpace

2012-09-18 Thread Jed Brown
Do we really need a new routine for this? Why doesn't MatSetNullSpace() work? -- next part -- An HTML attachment was scrubbed... URL: <http://lists.mcs.anl.gov/pipermail/petsc-dev/attachments/20120918/2964ef4f/attachment.html>

[petsc-dev] Bad fortran interface generations

2012-09-18 Thread Stefano Zampini
: <http://lists.mcs.anl.gov/pipermail/petsc-dev/attachments/20120918/c8ff5bf8/attachment.html>

[petsc-dev] Bad fortran interface generations

2012-09-18 Thread Barry Smith
/usr/local/bin/bfort must be the old one that continued lines that exactly fit and thus confused the bg compiler. the --download brings down the latest sowing with the fix for continued lines. Barry Someone should remove the /usr/local/bin. one. On Sep 18, 2012, at 1:37 PM, Ste

[petsc-dev] Splitting up folder for user-manual and dev-manual (tex)?

2012-09-18 Thread Barry Smith
On Sep 18, 2012, at 11:57 AM, Karl Rupp wrote: > Hi guys, > > does anybody mind splitting up the src-folder for the PDF-manuals > (src/docs/tex/manual) into separate folders, e.g. > tex/manual/user/ - user manual > tex/manual/developer/ - dev manual Since developers.tex is a single fil

[petsc-dev] Splitting up folder for user-manual and dev-manual (tex)?

2012-09-18 Thread Karl Rupp
Hi guys, does anybody mind splitting up the src-folder for the PDF-manuals (src/docs/tex/manual) into separate folders, e.g. tex/manual/user/ - user manual tex/manual/developer/ - dev manual It seems like there are no common files to both manuals other than the style files. Otherwise,

[petsc-dev] Fwd: [petsc-maint #132779] Error while installing Petsc3-3p3

2012-09-18 Thread Matthew Knepley
t; >> > >> > >> > >> > >> > > > > > > -- What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. -- Norbert Wiener -- next part -- An HTML attachment was scrubbed... URL: <http://lists.mcs.anl.gov/pipermail/petsc-dev/attachments/20120918/2ea5677c/attachment.html>

[petsc-dev] Fwd: [petsc-maint #132779] Error while installing Petsc3-3p3

2012-09-18 Thread Barry Smith
Begin forwarded message: > From: Satish Balay > Subject: Re: [petsc-maint #132779] Error while installing Petsc3-3p3 > Date: September 18, 2012 11:22:18 AM CDT > To: petsc-maint at mcs.anl.gov, Charles Roge > Reply-To: petsc-maint at mcs.anl.gov, Satish Balay mcs.anl.gov> > > >> --w

[petsc-dev] Bad fortran interface generations

2012-09-18 Thread Satish Balay
Can you do rm -rf externalpackages/sowing* and rerun configure - and see if the problem persists? Satish On Tue, 18 Sep 2012, Stefano Zampini wrote: > Something is changed between HG revision > ce7508606e824d026ea20d05da900e98f37b3864 and the current tip which affected > the automatic generation

[petsc-dev] plans for testing examples?

2012-09-18 Thread Gerard Gorman
Jed Brown emailed the following on 17/09/12 23:49: > On Mon, Sep 17, 2012 at 5:28 PM, Gerard Gorman > mailto:g.gorman at imperial.ac.uk>> wrote: > > So if I understand you correctly I should start a python session > (handy > since buildbot is all python), import in your test harness and