Re: [petsc-dev] Broken link on website

2015-04-24 Thread Barry Smith
I have updated it to http://open-mx.gforge.inria.fr Thanks Barry > On Apr 24, 2015, at 4:34 AM, Patrick Farrell > wrote: > > On > > http://www.mcs.anl.gov/petsc/documentation/faq.html#computers > > the website states > > The software http://open-mx.org provides faster speed for ethe

[petsc-dev] HDF5 VecView bug for DMPlex global vectors.

2015-04-24 Thread Ataollah Mesgarnejad
Dear developers, I came across this bug when playing with HDF5 VecView. HDF5 VecView crashes if the default section for DMPlex only has dofs on the edges. Attached is a small code to reproduce the error. Best, Ata /** * @file * * Created by Ataollah Mesgarnejad on 3/26/15. * * This is a test for

Re: [petsc-dev] configuration error: Cannot compile C with mpicc

2015-04-24 Thread Balay, Satish
However mumps - and perhaps other packages require fortran. Satish From: Matthew Knepley Sent: ‎4/‎24/‎2015 2:11 PM To: Jin, Shuangshuang Cc: petsc-dev@mcs.anl.gov Subject: Re

Re: [petsc-dev] configuration error: Cannot compile C with mpicc

2015-04-24 Thread Matthew Knepley
On Fri, Apr 24, 2015 at 1:55 PM, Jin, Shuangshuang < shuangshuang@pnnl.gov> wrote: > Thanks for the quick fix for the problem. However I came up with a new one > now and the configure.log is too big to attach.. > > It seems to complain about mpif.h when I look at the log file. Here's a > piece

Re: [petsc-dev] configuration error: Cannot compile C with mpicc

2015-04-24 Thread Jin, Shuangshuang
Thanks for the quick fix for the problem. However I came up with a new one now and the configure.log is too big to attach.. It seems to complain about mpif.h when I look at the log file. Here's a piece of the error: Executing: gfortran -c -o /tmp/petsc-u4h0ot/config.libraries/conftest.o -I/tmp

Re: [petsc-dev] configuration error: Cannot compile C with mpicc

2015-04-24 Thread Barry Smith
CFLAGS=-03 should not be a 0 it should be an O for optimize > On Apr 24, 2015, at 1:33 PM, Jin, Shuangshuang > wrote: > > Hello, Petsc dev support team, > > I was trying to install the latest dev version PETSc on a linxu computer. I > got an error “Cannot compile C with mpicc”. Please s

[petsc-dev] configuration error: Cannot compile C with mpicc

2015-04-24 Thread Jin, Shuangshuang
Hello, Petsc dev support team, I was trying to install the latest dev version PETSc on a linxu computer. I got an error "Cannot compile C with mpicc". Please see my configure.log attached. Could you please help? Thanks, Shuangshuang configure.log Description: configure.log

Re: [petsc-dev] patch for subcomm

2015-04-24 Thread Hong
Stefano: Your patch is pushed to maint branch. Thanks! Hong On Thu, Apr 23, 2015 at 10:40 AM, h...@aspiritech.org wrote: > Stefano: > >> It seems to me that the current code for PetscSubcommSetTypeGeneral >> assumes that all colors will be provided within a range >> [0,max_color_value_provided]

Re: [petsc-dev] PetscCheckSameType

2015-04-24 Thread Lisandro Dalcin
On 24 April 2015 at 16:37, Jose E. Roman wrote: > > Shouldn't PetscCheckSameType compare type_name instead of type? > > #define PetscCheckSameType(a,arga,b,argb) \ > if (((PetscObject)a)->type != ((PetscObject)b)->type) > SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_NOTSAMETYPE,"Objects not of same t

[petsc-dev] PetscCheckSameType

2015-04-24 Thread Jose E. Roman
Shouldn't PetscCheckSameType compare type_name instead of type? #define PetscCheckSameType(a,arga,b,argb) \ if (((PetscObject)a)->type != ((PetscObject)b)->type) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_NOTSAMETYPE,"Objects not of same type: Argument # %d and %d",arga,argb);

[petsc-dev] Broken link on website

2015-04-24 Thread Patrick Farrell
On http://www.mcs.anl.gov/petsc/documentation/faq.html#computers the website states The software http://open-mx.org provides faster speed for ethernet systems, we have not tried it but it claims it can dramatically reduce latency and increase bandwidth on Linux system. You must first install