[petsc-dev] Test failures in PetscCommBuildTwoSided_Ibarrier?

2017-08-01 Thread Richard Tran Mills
Hi Folks, I am seeing a lot of errors when I run the full test suite (with latest master) on my MacBook, related to SEGVs inside (or thereabouts) PetscCommBuildTwoSided_Ibarrier. Do I have something mis-configured or ... ? Sample error message below: > [2]PETSC ERROR: ---

Re: [petsc-dev] Test failures in PetscCommBuildTwoSided_Ibarrier?

2017-08-01 Thread Satish Balay
Hm - we primarily use default apple clang/clang++ with gfortran from brew. And the nightlybuilds are fine [will have to check if something broke today] There was previously an issue with gcc from brew - but don't remember what it was. Satish On Tue, 1 Aug 2017, Richard Tran Mills wrote: > Hi

Re: [petsc-dev] Test failures in PetscCommBuildTwoSided_Ibarrier?

2017-08-01 Thread Richard Tran Mills
Thanks, Satish. I'll give things a try using clang/clang++ to see if the problem is related to the GCC I have installed. --Richard On Tue, Aug 1, 2017 at 4:46 PM, Balay, Satish wrote: > Hm - we primarily use default apple clang/clang++ with gfortran from brew. > > And the nightlybuilds are fine

Re: [petsc-dev] Test failures in PetscCommBuildTwoSided_Ibarrier?

2017-08-01 Thread Dave May
On 2 August 2017 at 00:39, Richard Tran Mills wrote: > Hi Folks, > > I am seeing a lot of errors when I run the full test suite (with latest > master) on my MacBook, related to SEGVs inside (or thereabouts) > PetscCommBuildTwoSided_Ibarrier. Do I have something mis-configured or > ... ? > Nope -

Re: [petsc-dev] Test failures in PetscCommBuildTwoSided_Ibarrier?

2017-08-01 Thread Barry Smith
Reported to MPICH folks https://github.com/pmodels/mpich/issues/2437 and ignored. What about using Gnu compilers and OpenMPI (allegedly OpenMPI has fixed up many of their ongoing bugs). Barry > On Aug 1, 2017, at 6:58 PM, Dave May wrote: > > > > On 2 August 2017 at 00:39, Richa

Re: [petsc-dev] Test failures in PetscCommBuildTwoSided_Ibarrier?

2017-08-01 Thread Matthew Knepley
On Tue, Aug 1, 2017 at 7:03 PM, Barry Smith wrote: > >Reported to MPICH folks https://github.com/pmodels/mpich/issues/2437 > and ignored. > If you guys cannot walk down the hall and get them to consider these bugs, we should just stop using MPICH and recommending it to unsuspecting people. T

Re: [petsc-dev] Test failures in PetscCommBuildTwoSided_Ibarrier?

2017-08-02 Thread Richard Tran Mills
Things work fine when I use clang, but I'd really like to be able to use GCC as well. I updated the ignored issue to reflect that the bug is still present when using GCC 7.1.0. I suppose I will give OpenMPI a try when I get a chance. --Richard On Tue, Aug 1, 2017 at 5:15 PM, Matthew Knepley wr

Re: [petsc-dev] Test failures in PetscCommBuildTwoSided_Ibarrier?

2017-08-02 Thread Satish Balay
On Wed, 2 Aug 2017, Richard Tran Mills wrote: > I suppose I will give OpenMPI a try when I get a chance. This works fine. Satish

Re: [petsc-dev] Test failures in PetscCommBuildTwoSided_Ibarrier?

2017-08-02 Thread Barry Smith
> On Aug 2, 2017, at 12:54 PM, Satish Balay wrote: > > On Wed, 2 Aug 2017, Richard Tran Mills wrote: > >> I suppose I will give OpenMPI a try when I get a chance. > > This works fine. This should be noted in the MPICH GitHub issues tracker. > > Satish

Re: [petsc-dev] Test failures in PetscCommBuildTwoSided_Ibarrier?

2017-08-02 Thread Zhang, Hong
GCC works great on Linux, but IMHO it is always problematic on Mac. I had a lot of trouble when using GCC on Mac for netcdf, libmesh and some other stuff. And it seems not easy to fix the problems on the library side. For example, the netcdf problem I got has existed for several years, and there