[petsc-users] DMPlex: vtk/vtu support for labels

2021-03-26 Thread Cameron Smith
Hello, I'm debugging our use of DMLabel to mark the mesh vertices in a 2d triangular mesh on the geometric model boundary. From what I understand, the latex/tikz and glvis viewers support rendering user labels via the following options: tikz: -dm_view :mesh.tex:ascii_latex -dm_plex_view_sca

Re: [petsc-users] creation of parallel dmplex from a partitioned mesh

2021-03-01 Thread Cameron Smith
Thank you. That makes sense. Using DMPlexPointLocalRef from petsc master worked for me; time to debug. https://www.mcs.anl.gov/petsc/petsc-master/docs/manualpages/DMPLEX/DMPlexPointLocalRef.html -Cameron On 2/26/21 8:32 AM, Matthew Knepley wrote: On Thu, Feb 25, 2021 at 4:57 PM Cameron Smith

Re: [petsc-users] creation of parallel dmplex from a partitioned mesh

2021-02-25 Thread Cameron Smith
Please let us know if other info is needed. We are happy to share the relevant source code. Thank-you, Cameron On 8/25/20 8:34 AM, Cameron Smith wrote: On 8/24/20 4:57 PM, Matthew Knepley wrote: On Mon, Aug 24, 2020 at 4:27 PM Jed Brown <mailto:j...@jedbrown.org>> wrote:     Camer

Re: [petsc-users] creation of parallel dmplex from a partitioned mesh

2020-08-25 Thread Cameron Smith
On 8/24/20 4:57 PM, Matthew Knepley wrote: On Mon, Aug 24, 2020 at 4:27 PM Jed Brown <mailto:j...@jedbrown.org>> wrote: Cameron Smith mailto:smith...@rpi.edu>> writes: > We made some progress with star forest creation but still have work to do. >

Re: [petsc-users] creation of parallel dmplex from a partitioned mesh

2020-08-24 Thread Cameron Smith
process i responsible for computations and communications associated with global vertices i*(N/P):(i+1)*(N/P)-1 ? We assumed it does and wanted to confirm. Thank-you, Cameron On 8/13/20 11:43 AM, Cameron Smith wrote: Thank you for the quick reply and the info.  We'll give it a shot and re

Re: [petsc-users] creation of parallel dmplex from a partitioned mesh

2020-08-13 Thread Cameron Smith
Thank you for the quick reply and the info. We'll give it a shot and respond if we hit any snags. -Cameron On 8/13/20 9:54 AM, Matthew Knepley wrote: On Thu, Aug 13, 2020 at 9:38 AM Cameron Smith <mailto:smith...@rpi.edu>> wrote: Hello, We have a partitioned mesh t

[petsc-users] creation of parallel dmplex from a partitioned mesh

2020-08-13 Thread Cameron Smith
Hello, We have a partitioned mesh that we want to create a DMPlex from that has the same distribution of elements (i.e., assignment of elements to processes) and vertices 'interior' to a process (i.e., vertices not on the inter-process boundary). We were trying to use DMPlexCreateFromCellLis

Re: [petsc-users] installing petsc via spack on ac922 (a summit like system)

2020-03-10 Thread Cameron Smith
|crt[0-9].[0-9][0-9].[0-9].o)$', arg) +m = re.match(r'^-l(ang.*|crt[0-9].o|crtbegin.o|c|gcc|gcc_ext(.[0-9]+)*|System|cygwin|xlomp_ser|crt[0-9].[0-9][0-9].[0-9].o)$', arg) if m: self.logPrint('Found system library therefore skipping: '+

Re: [petsc-users] installing petsc via spack on ac922 (a summit like system)

2020-03-10 Thread Cameron Smith
braries() are called. Satish On Tue, 10 Mar 2020, Cameron Smith wrote: Thank you. I'll give that a shot. Out of curiosity, how does passing the openmp flags relate to the '--with-openmp' option described here: https://www.mcs.anl.gov/petsc/documentation/installation.html unde

Re: [petsc-users] installing petsc via spack on ac922 (a summit like system)

2020-03-10 Thread Cameron Smith
tish On Tue, 10 Mar 2020, Cameron Smith wrote: Thank you Mark. The configure.log is attached. Please let me know if any other info is needed. -Cameron On 3/10/20 7:31 AM, Mark Adams wrote: Hi Cameron, This can go on the list and we always want the configure.log file. I build on Summit,