On Mon, Jan 24, 2022 at 9:53 AM Jed Brown wrote:
> "Paul T. Bauman" writes:
>
> > 1. `rocgdb` will be in your PATH when the `rocm` module is loaded. This
> is
> > gdb, but with some extra AMDGPU goodies. AFAIK, you cannot, yet, do
> > stepping through a ker
le through
`rocgdb` as one would do with `gdb` (`rocgdb` is literally `gdb` built with
extra AMD stuff (that stuff is either upstreamed or being upstreamed to gdb
BTW)). You can do it in batch mode as well so you can dump the logs from
each MPI process.
>
> On Mon, Jan 24, 2022 at 10:16 AM
On Mon, Jan 24, 2022 at 8:53 AM Matthew Knepley wrote:
> On Mon, Jan 24, 2022 at 9:24 AM Mark Adams wrote:
>
>> What is the fastest way to rebuild hypre? reconfiguring did not work and
>> is slow.
>>
>> I am printf debugging to find this HSA_STATUS_ERROR_MEMORY_FAULT (no
>> debuggers other than
Dammit, didn't reply-all. Sorry.
On Fri, Jan 21, 2022 at 8:52 AM Paul T. Bauman wrote:
>
>
> On Fri, Jan 21, 2022 at 8:37 AM Jed Brown wrote:
>
>> "Paul T. Bauman" writes:
>>
>> > On Fri, Jan 21, 2022 at 8:19 AM Jed Brown wrote:
>> &
On Fri, Jan 21, 2022 at 8:19 AM Jed Brown wrote:
> Mark Adams writes:
>
> > Two questions about hypre on HIP:
> >
> > * I am doing this now. Is this correct?
> >
> > '--download-hypre',
> > '--download-hypre-configure-arguments=--enable-unified-memory',
>
Apologies for interjecting, but
On Wed, Aug 24, 2016 at 1:22 PM, Matthew Knepley wrote:
> Notice that Paraview does exactly the wrong thing here in that it has
> straight lines connecting the midpoints and corners of the triangles.
>
Everytime I meet someone from Kitware, I complain about this and their
representation of quadr
Hi Barry,
On Thu, Feb 11, 2016 at 2:45 PM, Barry Smith wrote:
>
> > On Feb 11, 2016, at 1:36 PM, Boris Boutkov wrote:
> >
> > Hello All,
> >
> > I'm currently working on hooking into the PETSc multi-grid
> infrastructure by creating my own DMShell and providing my own
> interpolation and inject
On Thu, Jan 21, 2016 at 12:51 PM, Hong wrote:
> Paul:
> It might be caused by our changes in default shift strategy.
> We previously used '-pc_factor_shift_type NONZERO' for ilu, then changed
> to '-pc_factor_shift_type NONE'.
> For your test, I get
> ./ex10 -f0 test.mat -rhs 0 -pc_type asm -pc_a
Thanks Hong,
On Thu, Jan 21, 2016 at 12:16 PM, Hong wrote:
> Paul :
> Using petsc-dev (we recently added feature for better displaying
> convergence behavior),
>
OK, good to know, thanks.
> I found that '-sub_pc_factor_mat_ordering_type 1wd' causes zero pivot:
>
I figured it was something al
Greetings,
We have a test that has started failing upon switching from 3.5.4 to 3.6.0
(actually went straight to 3.6.3 but checked this is repeatable with
3.6.0). I've attached the matrix generated with -mat_view binary and a
small PETSc program that runs in serial that reproduces the behavior by
On Wed, Jul 15, 2015 at 9:23 PM, Paul T. Bauman wrote:
> (Shame on me, but is there a relevant GAMG publication?)
>
Arg, this came off bad, sorry. I meant, is there a particular publication
for which GAMG should be cited?
Maybe relevant pubs/bibtex could be added alongside the PETSc ones on the
PETSc webpage to help this? (Shame on me, but is there a relevant GAMG
publication?) It doesn't help with the disingenuous researcher not willing
to go the extra step of proper citation, but would certainly help someone
like
On Fri, Jun 5, 2015 at 3:37 PM, Barry Smith wrote:
>
> > On Jun 5, 2015, at 1:49 PM, Paul T. Bauman wrote:
> >
> >
> >
> > On Fri, Jun 5, 2015 at 2:42 PM, Harshad Sahasrabudhe <
> hsaha...@purdue.edu> wrote:
> > It is not the coloring you need
On Fri, Jun 5, 2015 at 2:42 PM, Harshad Sahasrabudhe
wrote:
> It is not the coloring you need to generate, just the nonzero structure.
>> (From that PETSc computes the coloring) so do as I suggest in my other
>> email.
>
>
> Thanks, I'll try that out.
>
FYI, this information is contained in th
On Wed, Jul 11, 2012 at 8:47 AM, Jed Brown wrote:
>
> Thanks for your test case. Yes, this is a PETSc bug associated with
> handling of DIFFERENT_NONZERO_PATTERN. Fixed here and will be in the next
> patch release.
>
> http://petsc.cs.iit.edu/petsc/releases/petsc-3.3/rev/09d701958d66
>
Awesome,
On Tue, Jul 10, 2012 at 1:34 PM, Paul T. Bauman wrote:
> Greetings,
>
> This question is somewhat related to this thread:
> http://lists.mcs.anl.gov/pipermail/petsc-users/2011-August/009583.html but
> instead of resurrecting that thread, I decided to start a new one.
>
> Su
Greetings,
This question is somewhat related to this thread:
http://lists.mcs.anl.gov/pipermail/petsc-users/2011-August/009583.html but
instead of resurrecting that thread, I decided to start a new one.
Summary: In the libMesh wrapper of PETSc's KSP, a call is made to
KSPSetOperators; I gather th
pilation
> doesn't work.
>
> Randy
>
>
>
>
> Paul T. Bauman wrote:
>> Sorry this took so long to get around to doing. So it turns out that
>> there's a newer version of 2.3.3p13 posted at the PETSc ftp server.
>> This worked flawlessly with the
Please send the configure.log to petsc-maint at mcs.anl.gov
>
>Barry
>
> On Aug 15, 2008, at 1:39 PM, Paul T. Bauman wrote:
>
>> Was there ever a fix/workaround introduced for this? I'm using
>> 2.3.3p13 and I'm having trouble getting the config to recogn
Was there ever a fix/workaround introduced for this? I'm using 2.3.3p13
and I'm having trouble getting the config to recognize mkl 10.0.3.020.
Thanks,
Paul
Barry Smith wrote:
>
> Could you email to petsc-maint at mcs.anl.gov ALL the messages as to
> what goes wrong with
> our current linking
t;
>Barry
>
>
> On Jul 23, 2008, at 1:04 PM, Satish Balay wrote:
>
>> On Wed, 23 Jul 2008, Paul T. Bauman wrote:
>>
>>> Hello,
>>>
>>> Quick (and probably stupid) question: Does CHKMEMQ check *all* of
>>> memory used
>>&
Hello,
Quick (and probably stupid) question: Does CHKMEMQ check *all* of memory
used by the program for corruption or just the memory PETSc allocated? I
have a code that I'm assigned to work on that doesn't use PETSc (yet),
but I was hoping to use this macro to track down what I think is a
mem
esolves this problem. If you are
> not using petsc-dev you can simply replace the file
> src/sys/fileio/ftn-custom/zmprintf.c with the attached file then run
> make lib shared
> in that directory then relink your program.
>
>Barry
>
>
> On Tue, 28 Aug 2007, Paul
shared
> in that directory then relink your program.
>
>Barry
>
>
> On Tue, 28 Aug 2007, Paul T. Bauman wrote:
>
>
>> Hello,
>>
>> Kind of a non-numerical question - sorry. I'm using PetscPrintf from Fortran
>> using the following call
(Since I don't
> really know Fortran, I don't know how to tell a Fortran compiler to
> embed a newline...)
>
> --Leif
>
>
> Matthew Knepley wrote:
>> On 8/28/07, Paul T. Bauman wrote:
>>> Hello,
>>>
>>> Kind of a non-numer
Hello,
Kind of a non-numerical question - sorry. I'm using PetscPrintf from
Fortran using the following calling sequence (for example):
call PetscPrintf(PETSC_COMM_WORLD,
"=== \n", ierr)
call PetscPrintf(PETSC_COMM_WORLD, " Be
ory() it does not return the arrays, just the
> count. You must keep around the arrays you passed into
> SNESSetConvergenceHistory() and read from them.
>
>Barry
>
>
> On Mon, 6 Aug 2007, Paul T. Bauman wrote:
>
>
>> Hello,
>>
>> Is it possi
Hi Ben,
Here is the format I use in my .f90 modules. Note I do not know what
the standard is, but this "style" has worked with ifort, gfortran, g95
and Visual Studio (so I'm told).
module IAmAModule
implicit none
private !(you don't need this if you don't want it)
#PREPROCESSING STATEMENTS
Hello,
Is it possible to use
SNESSetConvergenceHistory/SNESGetConvergenceHistory with FORTRAN? Thanks,
Paul
t;Barry
>
> The bug is that MatSetType() does not know that AIJMUMPS is inherited from
> AIJ and hence destroys the AIJ data structure (including the preallocation
> information) before creating a whole new AIJMUMPS matrix.
>
> On Sat, 14 Apr 2007, Paul T. Bauman wrote:
>
&
Hello,
I'm developing some code and am using direct solvers (for the moment),
in particular MUMPS and SuperLU. I noticed that PETSc is not
preallocating the memory for it even though I specify maximum number of
entries per row.
call
MatCreateSeqAIJ(PETSC_COMM_WORLD,total_num_dofs,total
Aaron,
Don't want to be rude and interject, but I looked at the unsteady.F file
- I've always had trouble compiling when 'use statements' come after
variable declarations. Give a try putting things in this order:
program
use modules
implicit none
include statements
variable declarations
c
rompt help.
Paul
Satish Balay wrote:
> BUS error is a bit suspicious. What can you send the output from all
> of the following commands..
>
> cd src/ksp/ksp/examples/tutorials
> make ex2f
> ./ex2f
> gdb ex2f
> (gdb) run
>
>
> Satish
>
> On Wed, 10 Jan 2007,
Yes, example ex5f broke in the exact same way. Note the preceding c/c++
examples worked perfectly. How would you suggest I proceed? Thanks,
Paul
Satish Balay wrote:
> Can you reproduce this with a PETSc example?
>
> make test
>
> Satish
>
> On Wed, 10 Jan 2007,
Hello,
Has anyone had any experience using PETSc and gfortran together? My
code compiles, but when I run it, it crashes with the following error
(mac Tiger 10.4.8, power pc, latest build of gfortran, MPICH2, petsc 2.3.2):
[0]PETSC ERROR:
---
Hello,
I'm a new PETSc user, so if the questions I ask are redundant, I
sincerely apologize. I was, however, unavailable to find the following
information in the manual pages.
I have two questions.
First: When using the SNES package, is the initial guess for the
/iterative linear solver/ (e.g
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