Re: [petsc-users] Eigenvalue problem in batch petsc-users Digest, Vol 84, Issue 59

2015-12-18 Thread Marco Zocca
Hi Venkatesh, it sounds like a job for the batch scheduler; again, a "bash" problem, with some additional variables: On a RHEL cluster, I was using Torque/PBS, which gives the `qsub`, `qstat` commands. I would guess that Cray has analogous ones . PETSc and SLEPc are instead toolkits for splitti

Re: [petsc-users] Eigenvalue problem in batch

2015-12-18 Thread venkatesh g
Hi, I have access to Cray with many cores. It takes about 100 secs to solve in a single core. If I require to solve it sequentially, it will take a lot of time. Ok I can ask the admins, but in case you have an idea, pls. let me know. Best Regards, Venkatesh On Fri, Dec 18, 2015 at 2:32 PM, Timoth

Re: [petsc-users] Eigenvalue problem in batch

2015-12-18 Thread Timothée Nicolas
You need to be more specific, what kind of machine do you have ? If you have very few cores, it will not help much to launch them all at the same time, but at least you can make the thing automatic using the loop as I told you. Your computer will solve the first problem and then automatically go to

Re: [petsc-users] Eigenvalue problem in batch

2015-12-18 Thread venkatesh g
Hi Timothee, Yes I have A_0001.bin ... A_1000.bin and B_0001.bin... B1000.bin. Yes is it possible to submit at same time ? Venkatesh On Fri, Dec 18, 2015 at 1:28 PM, Timothée Nicolas < timothee.nico...@gmail.com> wrote: > Hi, > > Can you be a bit more specific ? You have 1000 different files fo

Re: [petsc-users] Eigenvalue problem in batch

2015-12-17 Thread Timothée Nicolas
Hi, Can you be a bit more specific ? You have 1000 different files for A and B ? Like, you have A_0001.bin, A_0002.bin, ... A_1000.bin and B_0001.bin, B_0002.bin, ... B_1000.bin ? In that case it's a bash problem and not a petsc problem, you just need to make a loop on an integer i, use something

[petsc-users] Eigenvalue problem in batch

2015-12-17 Thread venkatesh g
Hi all, I am using Petsc and Slepc to solve my eigenvalue problem. I have 1000 A and B matrices saved as binary files. So I use in my script : *aprun -n 1 -N 1 ./ex7 -f1 A -f2 B -st_type sinvert -eps_target 0.01 * This is for one A and one B. So, how to do it for each A and B in multiple cores ?