Re: [petsc-users] Undefined reference in PETSc 3.13+ with old MPI version

2021-04-12 Thread Junchao Zhang
t; Thanks again for all your help, > > > > > > > > > > > > Danyang > > > > > > *From: *Junchao Zhang > > > *Date: *Sunday, April 11, 2021 at 7:54 AM > > > *To: *Danyang Su > > > *Cc: *Barry Smith , "p

Re: [petsc-users] Undefined reference in PETSc 3.13+ with old MPI version

2021-04-12 Thread Satish Balay via petsc-users
r help, > > > > > > > > Danyang > > > > *From: *Junchao Zhang > > *Date: *Sunday, April 11, 2021 at 7:54 AM > > *To: *Danyang Su > > *Cc: *Barry Smith , "petsc-users@mcs.anl.gov" < > > petsc-users@mcs.anl.gov> > > *Subje

Re: [petsc-users] Undefined reference in PETSc 3.13+ with old MPI version

2021-04-11 Thread Junchao Zhang
y, April 11, 2021 at 7:54 AM > *To: *Danyang Su > *Cc: *Barry Smith , "petsc-users@mcs.anl.gov" < > petsc-users@mcs.anl.gov> > *Subject: *Re: [petsc-users] Undefined reference in PETSc 3.13+ with old > MPI version > > > > Thanks, Glad to know you have a wo

Re: [petsc-users] Undefined reference in PETSc 3.13+ with old MPI version

2021-04-11 Thread Danyang Su
quot;petsc-users@mcs.anl.gov" Subject: Re: [petsc-users] Undefined reference in PETSc 3.13+ with old MPI version Thanks, Glad to know you have a workaround. --Junchao Zhang On Sat, Apr 10, 2021 at 10:06 PM Danyang Su wrote: Hi Junchao, I cannot configure your branch with same

Re: [petsc-users] Undefined reference in PETSc 3.13+ with old MPI version

2021-04-11 Thread Junchao Zhang
t; > > > *From: *Danyang Su > *Date: *Saturday, April 10, 2021 at 4:08 PM > *To: *Junchao Zhang > *Cc: *Barry Smith , "petsc-users@mcs.anl.gov" < > petsc-users@mcs.anl.gov> > *Subject: *Re: [petsc-users] Undefined reference in PETSc 3.13+ with old > MPI ve

Re: [petsc-users] Undefined reference in PETSc 3.13+ with old MPI version

2021-04-10 Thread Danyang Su
nce to `MPI_Win_create_dynamic' gmake[4]: *** [ex5f] Error 1 Thanks, Danyang From: Junchao Zhang Date: Saturday, April 10, 2021 at 3:57 PM To: Danyang Su Cc: Barry Smith , "petsc-users@mcs.anl.gov" Subject: Re: [petsc-users] Undefined reference in PETSc 3.13+ with ol

Re: [petsc-users] Undefined reference in PETSc 3.13+ with old MPI version

2021-04-10 Thread Danyang Su
te_dynamic' gmake[4]: *** [ex5f] Error 1 Thanks, Danyang From: Junchao Zhang Date: Saturday, April 10, 2021 at 3:57 PM To: Danyang Su Cc: Barry Smith , "petsc-users@mcs.anl.gov" Subject: Re: [petsc-users] Undefined reference in PETSc 3.13+ with old MPI version You sent

Re: [petsc-users] Undefined reference in PETSc 3.13+ with old MPI version

2021-04-10 Thread Junchao Zhang
danyangs/soft/petsc/petsc-3.14.6/config/BuildSystem/config/packages/OpenMPI.py", > line 63, in Install > > installDir = config.package.GNUPackage.Install(self) > > File > "/global/home/danyangs/soft/petsc/petsc-3.14.6/config/BuildSystem/config/package.py", > line 1667, in Install > > ra

Re: [petsc-users] Undefined reference in PETSc 3.13+ with old MPI version

2021-04-10 Thread Danyang Su
g From: Barry Smith Date: Saturday, April 10, 2021 at 10:31 AM To: Danyang Su Cc: "petsc-users@mcs.anl.gov" Subject: Re: [petsc-users] Undefined reference in PETSc 3.13+ with old MPI version Depending on the network you can remove the ./configure options --with-cc=mpicc --with

Re: [petsc-users] Undefined reference in PETSc 3.13+ with old MPI version

2021-04-10 Thread Junchao Zhang
e.GNUPackage.Install(self) >> >> File >> "/global/home/danyangs/soft/petsc/petsc-3.14.6/config/BuildSystem/config/package.py", >> line 1667, in Install >> >> raise RuntimeError('Error running configure on ' + self.PACKAGE) >> >&g

Re: [petsc-users] Undefined reference in PETSc 3.13+ with old MPI version

2021-04-10 Thread Junchao Zhang
nfig/BuildSystem/config/package.py", > line 1667, in Install > > raise RuntimeError('Error running configure on ' + self.PACKAGE) > > > ============================ > > Finishing configure run at Sat,

Re: [petsc-users] Undefined reference in PETSc 3.13+ with old MPI version

2021-04-10 Thread Danyang Su
20 -0700 Thanks, Danyang From: Barry Smith Date: Saturday, April 10, 2021 at 10:31 AM To: Danyang Su Cc: "petsc-users@mcs.anl.gov" Subject: Re: [petsc-users] Undefined reference in PETSc 3.13+

Re: [petsc-users] Undefined reference in PETSc 3.13+ with old MPI version

2021-04-10 Thread Barry Smith
Depending on the network you can remove the ./configure options --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 and use instead --with-cc=icc --with-cxx=icpc and--with-fc=ifort --download-openmpi Barry > On Apr 10, 2021, at 12:18 PM, Danyang Su wrote: > > Dear PETSc developers and

[petsc-users] Undefined reference in PETSc 3.13+ with old MPI version

2021-04-10 Thread Danyang Su
Dear PETSc developers and users, I am trying to install the latest PETSc version on an ancient cluster. The OpenMPI version is 1.6.5 and Compiler is Intel 14.0, which are the newest on that cluster. I have no problem to install PETSc up to version 3.12.5. However, if I try to use PETSc 3.13+