Bio-IT World Conference

2009-04-15 Thread Susie M Stephens
As the HCLS F2F meeting backs onto Bio-IT World, I wanted to send you some background information about the conference. Cheers, Susie Cambridge Healthtech Institute’s 7th annual Bio-IT World Conference & Expo Enabling Technology. Leveraging Data. Transforming Medicine. April 27-29, 2009, World

LODD Telcon Minutes

2009-04-15 Thread Susie M Stephens
Minutes from today's LODD call are available [1]. Thanks to Matthias for scribing. Susie [1] http://esw.w3.org/topic/HCLSIG/LODD/Meetings/2009-04-15_Conference_Call

Re: [lodd][biordf] Loaded LODD datasets into the DERI HCLS knowledge base

2009-04-15 Thread Kingsley Idehen
Anja Jentzsch wrote: Hi Kingsley, Kingsley Idehen schrieb: Matthias Samwald wrote: Hi Kingsley, I did a few example queries. Your instance has LinkedCT, but it still lacks DrugBank (no surprise, Anja just made the dump available very recently and it is not documented on the wiki yet). Anja

Re: [lodd][biordf] Loaded LODD datasets into the DERI HCLS knowledge base

2009-04-15 Thread Kingsley Idehen
Matthias Samwald wrote: Anja fixed the issue with blank spaces in the Diseasome URIs (thanks, Anja!). They have been replaced by underscores. Now all of the original LODD datasources are in the HCLS KB. http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup/DERI_HCLS_KB was updated accordingly. Other

HCLS Telcon reminder

2009-04-15 Thread M. Scott Marshall
Here's the reminder for Thursday's HCLS call. Please bring ideas for cross-linking between task forces, use cases that bridge them, and any questions you may have about the upcoming F2F. In general, what coordination will optimize the F2F for you? We have a number of requests for F2F particip

Re: [lodd][biordf] Loaded LODD datasets into the DERI HCLS knowledge base

2009-04-15 Thread Anja Jentzsch
Hi Kingsley, Kingsley Idehen schrieb: Matthias Samwald wrote: Hi Kingsley, I did a few example queries. Your instance has LinkedCT, but it still lacks DrugBank (no surprise, Anja just made the dump available very recently and it is not documented on the wiki yet). Anja: is the a link to the

Re: [lodd][biordf] Loaded LODD datasets into the DERI HCLS knowledge base

2009-04-15 Thread Matthias Samwald
Anja fixed the issue with blank spaces in the Diseasome URIs (thanks, Anja!). They have been replaced by underscores. Now all of the original LODD datasources are in the HCLS KB. http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup/DERI_HCLS_KB was updated accordingly. Other potential additions to t

Re: [lodd][biordf] Loaded LODD datasets into the DERI HCLS knowledge base

2009-04-15 Thread Egon Willighagen
On Wed, Apr 15, 2009 at 3:27 PM, Matthias Samwald wrote: > I did a few example queries. > Your instance has LinkedCT, but it still lacks DrugBank (no surprise, Anja > just made the dump available very recently and it is not documented on the > wiki yet). Your instance also seems to contain Diseaso

Re: [lodd][biordf] Loaded LODD datasets into the DERI HCLS knowledge base

2009-04-15 Thread Kingsley Idehen
Matthias Samwald wrote: Hi Kingsley, I did a few example queries. Your instance has LinkedCT, but it still lacks DrugBank (no surprise, Anja just made the dump available very recently and it is not documented on the wiki yet). Anja: is the a link to the dump from the D2R based pages? I would

Re: [lodd][biordf] Loaded LODD datasets into the DERI HCLS knowledge base

2009-04-15 Thread Matthias Samwald
Hi Kingsley, I did a few example queries. Your instance has LinkedCT, but it still lacks DrugBank (no surprise, Anja just made the dump available very recently and it is not documented on the wiki yet). Your instance also seems to contain Diseasome. Was it loaded from the dump or 'crawled'?

Re: [lodd][biordf] Loaded LODD datasets into the DERI HCLS knowledge base

2009-04-15 Thread Kingsley Idehen
Matthias Samwald wrote: I have loaded some of the Linking Open Drug Data datasets into the HCLS KB at DERI Galway. See http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup/DERI_HCLS_KB for documentation (still incomplete). The data from Diseasome will be added after an issue with URIs is fixed (so

[lodd][biordf] Loaded LODD datasets into the DERI HCLS knowledge base

2009-04-15 Thread Matthias Samwald
I have loaded some of the Linking Open Drug Data datasets into the HCLS KB at DERI Galway. See http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup/DERI_HCLS_KB for documentation (still incomplete). The data from Diseasome will be added after an issue with URIs is fixed (some of them contain blank s