[bioportal-announce] BioPortal 3.1 Released

The National Center for Biomedical Ontology is pleased to announce the release of BioPortal 3.1. New features include updates to the Web interface and Web services: Support for loading OWL 2 ontologies Security Framework, part 2 - The apikey parameter is now required for all Web services. Login

CFP: JBI Special Issue on Community-Driven Curation of Ontologies and Knowledge Bases in HealthCare and Life Sciences

=== CALL FOR PAPERS Journal of Biomedical Informatics (Elsevier) - http://www.elsevier.com/locate/yjbin Special Issue on Community-Driven Curation of Ontologies and Knowledge Bases in HealthCare and Life Sciences ===

Scientific Discourse Meeting, July 11, 2011: Talk by Adrian Walker

Dear all, You are cordially invited to the Scientific Discourse call on Monday, July 11th, where Adrian Walker from will give a talk on 'Application Semantics via Rules in Open Vocabulary Executable English': Application Semantics via Rules in Open Vocabulary Executable English Adrian Walker

RE: GXA triples

hi helen, good point! the actually purpose of the note/paper, i think, is to delineate this. i think the main use case for this is to provide provenance about the experiment so that various searches on the facets of the experiment are possible, such as from similar lab, similar conditions, simil

Re: GXA triples

Hi Michael it would help to prioritize what to represent if we had a set of concrete use cases for the points you mention. We can generate RDF for lots of elements of the experiments of course - cheers Helen On 08/07/2011 15:37, Michael Miller wrote: hi tomasz, thanks for the update, nice

RE: GXA triples

hi tomasz, thanks for the update, nice! and again to jun for hosting. the documentation is appreciated, interestingly enough, in the diagram, it looks like it is only the relationship between the experiment, the set of sequences and their differential measurements per experimental factor value.

GXA triples

Hi All, Jun has kindly reloaded a new batch of Atlas triples that James and I generated. In this release there are up to 500 top differentially expressed genes per experiment available and a total number of triples increased from ~37 to ~170 million. More information is available at: http://

CFP: Joint Workshop on Knowledge Evolution and Ontology Dynamics (EvoDyn 2011)

[Apologies for cross-posting] CALL FOR PAPERS Joint Workshop on Knowledge Evolution and Ontology Dynamics (EvoDyn 2011) Collocated with the 10th International Semantic Web Conference (ISWC2011) October 23rd or 24th, 2011 Bon

CFP: Journal of Biomedical Informatics - Special Issue on Community-Driven Curation of Ontologies and Knowledge Bases in HealthCare and Life Sciences

[Apologies for cross-posting] === CALL FOR PAPERS Journal of Biomedical Informatics (Elsevier) - http://www.elsevier.com/locate/yjbin Special Issue on Community-Driven Curation of Ontologies and Knowledge Bases in HealthCare and Life Sciences =

GXA triples

Hi, [Resending as my original email seems to be lost in moderation.] Jun has kindly reloaded a new batch of Atlas triples that James and I generated. In this release there are up to 500 top differentially expressed genes per experiment available and a total number of triples increased from ~37 t