Curation and annotation tools used by the databases

2012-06-11 Thread Michael Hucka
On Wed, 6 Jun 2012 18:26:26 +0200, Franco Du Preez wrote: > Thanks again to Mike for presenting today. At the end of the > discussion there was a question about the tools used by the BioModels > team to annotate models in their database. I just wanted to add that > at JWS Online we make use of a

Re: Systems Biology / W3C telco - TODAY at 11AM EST

2012-06-06 Thread Michael Hucka
Hi, My presentation slides are available here: http://www.slideshare.net/thehuck/mhucka-hclssysbiojune2012key (Note: don't be put off by the number of slides; there are extras, and many will go very quickly. I am aiming for 30 minutes or less.) Thanks, MH -- Mike Hucka, Ph.D. -- mhu...@calt

Re: Reminder: SysBio Wednesday 11AM ET / 4PM GMT / 5PM CET

2012-05-24 Thread Michael Hucka
Hi Jun, Thanks for your mail. Just a quick reply on the following: On Wed, 23 May 2012 13:35:56 +0100, Jun Zhao wrote: > Our next meeting will be on June 6. Hope you or your colleagues can > make it. http://co.mbine.org/events/HARMONY_2012 looks a very > relevant and interesting event. If you

Re: Reminder: SysBio Wednesday 11AM ET / 4PM GMT / 5PM CET

2012-05-23 Thread Michael Hucka
Hello, I've been meaning to introduce myself to the Systems Biology Task Force for some time, and I apologize for taking so long. As one of the creators of SBML and several other community standardization efforts, as well as having help start BioModels Database itself, you can imagine the topi

Re: Question about standardization

2009-05-18 Thread Michael Hucka
SS> Hi Mike, It's good to hear from you. SS> Would you be interested in having a call to discuss SS> the various options? Hi Susie, Good to hear from you too! It's been a while :-). A call (I presume a group call?) sounds like a good idea. What kind of time frame do you have in mind? I'd

Re: Question about standardization

2009-05-17 Thread Michael Hucka
Hi Bijan, and others, The following are some replies to parts of multiple separate messages, all put here in one place to (hopefully) make reading easier: bparsia> MIchael, there's no question in my mind that bparsia> HCLSIG is a perfectly find venue to discuss SBML bparsia> and do HCLSIG s

Re: Question about standardization

2009-05-12 Thread Michael Hucka
Hi Oliver, Thanks for your reply. curoli> You just have to allow some time for people here curoli> to get familiar with SBML, and to navigate the curoli> buerocracy. OK. What would be the best way to help that along? curoli> Systems Biology is a central theme in the HCLSIG, curoli> a

Re: Question about standardization

2009-05-12 Thread Michael Hucka
Hi, >> I hope this is not too off-topic -- I'm new to this >> group and still am trying to get a sense for what it's >> about. bparsia> The way to figure out it's formal scope is to bparsia> read the charter: bparsia> http://www.w3.org/2008/05/HCLSIGCharter In fact, I did that before

Question about standardization

2009-05-11 Thread Michael Hucka
Hello there, I hope this is not too off-topic -- I'm new to this group and still am trying to get a sense for what it's about. Those of us working on SBML (the Systems Biology Markup Language -- see http://sbml.org) would like to pursue standards-body recognition of SBML. Would this (HCLSIG) be