Dear Colleagues,
Tomorrow's upcoming HCLS Scientific Discourse: Data+Experiment (DEXI) call
scheduled for
Mon Nov 29, 10am EST / 3pm GMT
will feature a presentation by Gully Burns (USC/ISI) on the KE-f-ED Model of
Experiments
Dial-in & IRC Information
Dial-In #: +1.617.761.6
Dear Colleagues,
This is a reminder of tomorrow's upcoming HCLS Scientific Discourse:
Data+Experiment (DEXI) call scheduled for
Mon Nov 29, 10am EST / 3pm GMT
Dial-in & IRC Information
Dial-In #: +1.617.761.6200 (Cambridge, MA)
Dial-In #: +33.4.26.46.79.03 (Paris, France)
Dial-In #: +44.203.31
"Karen (NIH/NIDA) [E] Skinner"
> <[EMAIL PROTECTED]>, Alan
> Ruttenberg
> <[EMAIL PROTECTED]>
>
> Subject
>
: [EMAIL PROTECTED]
> > [mailto:[EMAIL PROTECTED] On Behalf Of
> > Susie M Stephens
> > Sent: Tuesday, December 11, 2007 9:21 AM
> > To: Bill Bug
> > Cc: public-semweb-lifesci@w3.org hcls
> > Subject: Re: Experiment Ontology
> >
> >
> > Hi
ilto:[EMAIL PROTECTED] On Behalf Of
> Susie M Stephens
> Sent: Tuesday, December 11, 2007 9:21 AM
> To: Bill Bug
> Cc: public-semweb-lifesci@w3.org hcls
> Subject: Re: Experiment Ontology
>
>
> Hi Bill,
>
> Thanks for all of your great feedback. :-)
>
> The folks
<[EMAIL PROTECTED]>, Alan
Ruttenberg
<[EMAIL PROTECTED]>
Subject
Re: Experiment Ontology
Hi S
<[EMAIL PROTECTED]>
Subj
55
To: Susanna-A Sansone
Cc: public-semweb-lifesci@w3.org; OBI Developers
Subject: Re: [Obi-devel] Experiment Ontology
Hi Susanna,
We did take a look at OBI, but from what I understand it didn't meet our
needs.
We would be happy to work with OBI though.
Chee
Susie,
We certainly do need an "Experiment Ontology" - or Ontology of
Biomedical Investigation (OBI).
I believe Matthias, Michael, and Kei have all made exactly the points
I think are most important to consider:
1) Matthias's comments
Are you following "best practi
Hi Susie,
We certainly do need an "Experiment Ontology" - or Ontology of
Biomedical Investigation (OBI).
I believe Matthias, Michael, and Kei have all made exactly the points
I think are most important to consider:
1) Matthias's comments
Are you following &quo
<[EMAIL PROTECTED]>
Subject
This is great!
I have a microarray experiment description (that has to do with
Alzheimer Disease) extracted from NINDS microarray consortium:
http://arrayconsortium.tgen.org/np2/viewProject.do?action=viewProject&projectId=433773
I just wonder how this example would fit this experi
Hi, I am note sure about the background of this 'ontology for
experiments', but you may want to look at OBI effort too:
http://obi.sourceforge.net/
Susanna
Susie M Stephens wrote:
Lilly has done some preliminary work on defining an ontology for
experiments.
It would be great if you could t
can translate UML to RDF or OWL?
the problem i see in this Experiment Ontology is one of the issues that
occurred in creating MAGE and lead to refinements in FuGE. that is, the
choose of terms in life sciences always seems directed at a particular
type of experiment, here, things like chip type
Hi Susie,
Susie wrote:
It would be great if you could take a look at it and provide comments. The
ontology is available at:
http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup/Tasks/Experiment_Ontology
* Some of the entities/properties are missing a rdfs:label or have an empty
label (a string wit
Lilly has done some preliminary work on defining an ontology for
experiments.
It would be great if you could take a look at it and provide comments. The
ontology is available at:
http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup/Tasks/Experiment_Ontology
Cheers,
Susie
I have just setup a demo site for the new web2x semtantic publishing tool, which implements SPE ontology.
http://web2express.org/demo/
http://web2express.org is a real world example of using the web2x
publishing tool, where I have just started to self-publish my
experiments in semantic web resear
Thanks for your great comments on the requirements for the SPE
ontology. Based on the updated requirements
(http://esw.w3.org/topic/HCLS/SciPubSPERequirements), I have just
revised the specs and put it on the wiki for your review. Please see
the link to specs v0.2 on
http://esw.w3.org/topic/HCLS/S
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