Re: GO_REF URI prefix?

2013-07-26 Thread N Juty
We actually had this in our curation pipeline, but since it's clearly needed, I've just released it: data set - http://identifiers.org/go.ref/ example - http://identifiers.org/go.ref/GO_REF:045 Chris, if you have any suggestions to improve the entry could you let me know please, particularl

Re: GO_REF URI prefix?

2013-07-26 Thread Michel Dumontier
Hi Jim, I added the entry to our life science registry [1]. Bio2RDF will use http://bio2rdf.org/go.ref:## m. [1] http://tinyurl.com/dataregistry On Thu, Jul 25, 2013 at 11:41 PM, Jim McCusker wrote: > Does anyone know what the URI prefix is for GO_REF? And no, > http://www.geneontology.

Re: GO_REF URI prefix?

2013-07-25 Thread Chris Mungall
Obviously the current URLs aren't very linked data friendly. E.g. http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:026 We would most likely end up having the prefix be something under the GO purl, e.g. http://purl.obolibrary.org/obo/go/reference/ It hasn't been our highest priority.

Re: GO_REF URI prefix?

2013-07-25 Thread Jim McCusker
Ugh, those don't look like they're likely to be linked data, but I guess I'll go with it for now. Thanks, Jim On Thu, Jul 25, 2013 at 7:11 PM, Joachim Baran wrote: > > On 2013-07-25, at 7:02 PM, Jim McCusker wrote: > > GO_REF != GO. I don't see anything in identifiers.org about GO_REF. > > O

Re: GO_REF URI prefix?

2013-07-25 Thread Joachim Baran
On 2013-07-25, at 7:02 PM, Jim McCusker wrote: > GO_REF != GO. I don't see anything in identifiers.org about GO_REF. Oh. Right. Then it is the URI you posted as it says in http://www.geneontology.org/cgi-bin/xrefs.cgi#ref-g and http://www.geneontology.org/doc/GO.xrf_abbs of course. Joachim

Re: GO_REF URI prefix?

2013-07-25 Thread Jim McCusker
GO_REF != GO. I don't see anything in identifiers.org about GO_REF. Jim On Thu, Jul 25, 2013 at 6:25 PM, Joachim Baran wrote: > Hi! > > On 2013-07-25, at 5:41 PM, Jim McCusker wrote: > > Does anyone know what the URI prefix is for GO_REF? And no, > http://www.geneontology.org/cgi-bin/referen

Re: GO_REF URI prefix?

2013-07-25 Thread Joachim Baran
Hi! On 2013-07-25, at 5:41 PM, Jim McCusker wrote: > Does anyone know what the URI prefix is for GO_REF? And no, > http://www.geneontology.org/cgi-bin/references.cgi doesn't count. :-) A tricky one that is! :) identifiers.org says: http://identifiers.org/go/ See more alternatives here:

GO_REF URI prefix?

2013-07-25 Thread Jim McCusker
Does anyone know what the URI prefix is for GO_REF? And no, http://www.geneontology.org/cgi-bin/references.cgi doesn't count. :-) Thanks, Jim -- Jim McCusker Programmer Analyst Krauthammer Lab, Pathology Informatics Yale School of Medicine james.mccus...@yale.edu | (203) 785-4436 http://krauthamm