Re: Hosted Triple Store Oracle RDF DM - and access to BioRDF examples in general

2007-01-25 Thread John Barkley
Another good article on this subject is: http://www.oracle.com/technology/tech/semantic_technologies/pdf/vldb_2005.pdf jb From: William Bug <[EMAIL PROTECTED]> Date: Wed, 24 Jan 2007 16:41:01 -0500 Message-Id: <[EMAIL PROTECTED]> Cc: public-semweb-lifesci hcls To: Susie Stephens <[EMAIL PROT

Re: Hosted Triple Store Oracle RDF DM - and access to BioRDF examples in general

2007-01-24 Thread William Bug
Thanks, Susie. Thanks too for the clarification on the "native triple store". I thought based on the fact there is a triple import mechanism and - as you said - you are leveraging the native graph processing/indexing engine already in Oracle - meant the implementation of RDF in Oracle wa

Re: Hosted Triple Store Oracle RDF DM - and access to BioRDF examples in general

2007-01-24 Thread Susie Stephens
The URL for Oracle's manual is actually: http://download.oracle.com/otndocs/tech/semantic_web/pdf/rdfrm.pdf Cheers, Susie William Bug wrote: Scott has a link up to the Oracle RDF DM http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup/Hosted_Triple_Store http://download.oracle.com/otndocs/tech/sem

Re: Hosted Triple Store Oracle RDF DM - and access to BioRDF examples in general

2007-01-22 Thread William Bug
Aha. Many thanks for the due diligence on this issue, Eric. Cheers, Bill On Jan 22, 2007, at 9:52 AM, Eric Jain wrote: Sean Martin wrote: The one valid one that Eric tried works fine for me, both for data and metadata. http://lsid-info.org/ urn:lsid:ncbi.nlm.nih.gov.lsid.biopathways.org:p

Re: Hosted Triple Store Oracle RDF DM - and access to BioRDF examples in general

2007-01-22 Thread William Bug
Many thanks, Sean. I understand the need for a resolver, but I'd thought I'd remembered last Spring actually using this LSID plugin to look at the fruits of all that wonderful work Eric had done on RDFizing UniProt, but I guess that's just a memory phantom. ;-) By the way, I'm still not

Re: Hosted Triple Store Oracle RDF DM - and access to BioRDF examples in general

2007-01-22 Thread Eric Jain
Sean Martin wrote: The one valid one that Eric tried works fine for me, both for data and metadata. http://lsid-info.org/urn:lsid:ncbi.nlm.nih.gov.lsid.biopathways.org:pubmed:12441807? returns: Indeed, and it looks like the problem with the plug-in was that it has to connect to port 9090 o

Re: Hosted Triple Store Oracle RDF DM - and access to BioRDF examples in general

2007-01-22 Thread William Bug
Many thanks for doing the follow-up, EricJ. This is very helpful. Cheers, Bill On Jan 22, 2007, at 6:21 AM, Eric Jain wrote: William Bug wrote: Also - for loading remote LSID resources: I thought I remembered after having loaded Roderick Page's Firefox LSID extension, I could just paste t

Re: Hosted Triple Store Oracle RDF DM - and access to BioRDF examples in general

2007-01-22 Thread Sean Martin
Hello Bill, [EMAIL PROTECTED] wrote on 01/22/2007 06:21:19 AM: > > William Bug wrote: > > Also - for loading remote LSID resources: > > It installed just fine, but when I try to access: > > urn:lsid:uniprot.org:keywords:462 > > > > I get an error back claiming "unknown protocol". As Eric says

Re: Hosted Triple Store Oracle RDF DM - and access to BioRDF examples in general

2007-01-22 Thread Eric Jain
William Bug wrote: Also - for loading remote LSID resources: I thought I remembered after having loaded Roderick Page's Firefox LSID extension, I could just paste the following in the Firefox URL text box, hit return, and the plug-in contacted an LSID Resource Resolution server at IBM to retu

Hosted Triple Store Oracle RDF DM - and access to BioRDF examples in general

2007-01-21 Thread William Bug
Scott has a link up to the Oracle RDF DM http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup/Hosted_Triple_Store http://download.oracle.com/otndocs/tech/semantic_web/rdfrm.pdf That link at Oracle now trips a 404 error. Is it OK to use the following returned by the OTN site search engi