Re: LSID lookup details: help?

2006-09-26 Thread Sean Martin
son) 09/26/2006 12:09 PM To Dan Connolly <[EMAIL PROTECTED]> cc Sean Martin/Cambridge/[EMAIL PROTECTED], public-semweb-lifesci@w3.org, Alan Ruttenberg <[EMAIL PROTECTED]>, Noah Mendelsohn/Cambridge/[EMAIL PROTECTED] Subject Re: LSID lookup details: help? -BEGI

Re: LSID lookup details: help?

2006-09-26 Thread Henry S. Thompson
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 On 31 July 2006, Dan Connolly wrote: > In today's call, I learned a bit about how LSID lookup > works: > > (1) try to find an SRV record using the domain in the LSID > (2) fall back to a DDDS lookup and NAPTR and such > > Option (2) depends on some

Re: LSID lookup details: help? [was: All about the LSID URI/URN]

2006-07-31 Thread Benjamin H Szekely
Ben Szekely IBM Software Engineer Advanced Internet Technology, Cambridge, MA [EMAIL PROTECTED] [EMAIL PROTECTED] wrote on 07/31/2006 10:57:30 PM: > > On Mon, 2006-07-31 at 15:27 -0400, [EMAIL PROTECTED] wrote: > > dan, > > > > I recall reading that the PDB Resolver is offline pending > > upg

Re: LSID lookup details: help? [was: All about the LSID URI/URN]

2006-07-31 Thread Dan Connolly
On Mon, 2006-07-31 at 15:27 -0400, [EMAIL PROTECTED] wrote: > dan, > > I recall reading that the PDB Resolver is offline pending > upgrades. Ah... so 404 happens in the LSID world too. :) Wait... isn't this exactly the case where the software is supposed to fall back to DDNS/NAPTR stuff? Is th

Re: LSID lookup details: help? [was: All about the LSID URI/URN]

2006-07-31 Thread Dan Connolly
On Mon, 2006-07-31 at 15:15 -0400, Benjamin H Szekely wrote: > > Perhaps try one of the following LSIDs > > urn:lsid:gdb.org:GenomicSegment:GDB132938 > urn:lsid:ncbi.nlm.nih.gov.lsid.biopathways.org:pubmed:12441807 OK, yes, those seem to work. Thanks. -- Dan Connolly, W3C http://www.w3.or

Re: LSID lookup details: help? [was: All about the LSID URI/URN]

2006-07-31 Thread jbarkley
dan, I recall reading that the PDB Resolver is offline pending upgrades. You might try urn:lsid:gdb.org:GenomicSegment:GDB132938 which does work with the BioPathways Resolver: http://lsid.biopathways.org/resolver/urn:lsid:gdb.org:Genom icSegment:GDB132938 jb Quoting Dan Connolly <[EMAIL P

Re: LSID lookup details: help? [was: All about the LSID URI/URN]

2006-07-31 Thread Benjamin H Szekely
Perhaps try one of the following LSIDs urn:lsid:gdb.org:GenomicSegment:GDB132938 urn:lsid:ncbi.nlm.nih.gov.lsid.biopathways.org:pubmed:12441807 - Ben Ben Szekely IBM Software Engineer Advanced Internet Technology, Cambridge, MA [EMAIL PROTECTED] [EMAIL PROTECTED] wrote on 07/31/2006 01:34:31 P

Re: LSID lookup details: help? [was: All about the LSID URI/URN]

2006-07-31 Thread Benjamin H Szekely
Based on some quick research Steve Evanchik did at the lab here... "The domain rcsb.org periodically doesn't resolve correctly on my machine: $ nslookup.exe rcsb.org Server:  somdns01.srv.ibm.com Address:  9.0.5.1 Name:    rcsb.org and from my Linux machine: [EMAIL PROTECTED]:~> nslookup rc

LSID lookup details: help? [was: All about the LSID URI/URN]

2006-07-31 Thread Dan Connolly
In today's call, I learned a bit about how LSID lookup works: (1) try to find an SRV record using the domain in the LSID (2) fall back to a DDDS lookup and NAPTR and such Option (2) depends on some NAPTR stuff in the "arpa" parts of DNS space that OMG is expected to install but hasn't gotten a