[PyMOL] Measuring Angles

2004-08-13 Thread Anthony Williams
Hi, I'm fairly new to Pymol have gone through the documentation I can see a section for measuring dihedral angles and bond lengths but nothing for angles between three atom centres. I would like to collect measurements for a group of objects that I have loaded into pymol, put I'm not sure

Re: [PyMOL] PyMOL tutorial (moved and slightly updated)

2004-08-13 Thread D. Joe Anderson
On Tue, Aug 03, 2004 at 11:31:04AM -0700, chuit...@interchange.ubc.ca wrote: Hello, I have a small tutorial for getting started with PyMOL and I have no idea if people actually use it... Anyway, our server has changed and the webpage has been moved to:

Re: [PyMOL] PyMOL tutorial (moved and slightly updated)

2004-08-13 Thread Michael Banck
On Fri, Aug 13, 2004 at 08:34:17AM -0500, D. Joe Anderson wrote: I have a small tutorial for getting started with PyMOL and I have no idea if people actually use it... Anyway, our server has changed and the webpage has been moved to: http://www.microbiology.ubc.ca/eltis/pymol/ Can you

RE: [PyMOL] Measuring Angles

2004-08-13 Thread Warren DeLano
Anthony, New in version 0.97 is a get_angle function that takes three single-atom selections. There is also a get_distance that is more efficient than the distance command (which creates objects)... See help get_angle To set up a loop, you'll need to generate a list of selections # for