Lucas,
The movie may be playing...try clicking the stop button or using the mstop
command.
Cheers,
Warren
--
Warren L. DeLano, Ph.D.
Principal Scientist
. DeLano Scientific LLC
. 400 Oyster Point Blvd., Suite 213
. South San Francisco, CA 94080 USA
. Biz:(6
I've recently came into a problem with PyMol
version 0.98. As it generaly raytrace correctly most
pictures I generate, I think the only difference in
this case is that it contains a "isomesh" around a
ligand generated from an electron density map. When I
use the command "ray 1600, 1200" and then
Pymol community,
I'm trying to ray-trace (ray 3000,2250) a stereoview of a molecule but the
image displayed once I save the rendered figure (trough png) correspond to the
normal view of the molecule (no stereoview!?). Pymol seems to do it if the
figure is saved trough the GUI, which gives a lo
Pymol community,
I'm trying to ray-trace (ray 3000,2250) a stereoview of a molecule but the
image displayed once I save the rendered figure (trough png) correspond to the
normal view of the molecule (no stereoview!?). Pymol seems to do it if the
figure is saved trough the GUI, which gives a lo
I really like the preset views that Pymol offers in the Actions menu of the
internal GUI. I was wondering if there was a way to produce more preset
views and add them to the menu??
Thanks
Laura
_
FREE pop-up blocking with the new
Doug,
I can't be sure, but this looks like a problem with MacOS X binding PyMOL to
the wrong shared object, quite possibly due to some change in the resolution
order...your analysis is on track. To fix this, try to figure out what
entry in PATH, LD_LIBRARY_PATH, (or whatever mechanism MacOS uses
Hi All-
I've been using a shell script called 'macpymol' to start PyMOL from
the command line under OS X (pre-Tiger):
#!/bin/sh
/Applications/PyMOLX11Hybrid.app/Contents/MacOS/PyMOL $*
usage: macpymol file.pdb
I noticed if I use Fink to install an application under OS X (Tiger)
t
I also want to know how to get the coordinates of the surface vertexs
and the topology of the surface triangles.
Thanks!
Douglas McKinney wrote:
I need to know what surface the "show surface" command
shows. Is it the molecular surface, surface
accessibility, etc. I didn't see anything in t
