RE: [PyMOL] saving files in pymol

2006-04-15 Thread Warren DeLano
Paulo, Thank you for the simple and helpful suggestion -- this is exactly the kind of input that can enable us to improve the software with a trivial amount of effort on everyone's part. PyMOL will now issue a warning if you save a PDB file using an extension it does not recognize. Cheers,

Re: [PyMOL] changing individual sphere sizes

2006-04-15 Thread Tsjerk Wassenaar
Hi Laura, You can change the van der Waals radii of atoms using alter selection, vdw=newradius Alternatively, you can use the setting sphere_scale (set sphere_scale,factor), which changes all radii by the given factor. Note that you need to create different objects to use different factors for