Re: [PyMOL] Cutaway surfaces

2006-08-02 Thread EPF (Esben Peter Friis)
Hi Rob A bit confusing :-) But the trick in such cases is usually to duplicate your object, and show the cutaway surface on the original and the cartoon/helix/etc on the copy. The cutaway surface is often easier to create by box-selecting (with the mouse) everything but the part that should b

[PyMOL] Cutaway surfaces

2006-08-02 Thread Robert Court
Hi. I want to make a figure showing a cutaway surface representation of a large complex showing a channel containing a peptide helix. If I show the surface and cartoon representations respectively and fiddle around with the clipping and slabing I can't get it so that the channel is 'open' without