Hi,
I constructed a model (.pdb format) and attempted to eliminated some
of the excessive contortions in the loop when opened in PYMOL. I was
using "Auto-sculpting" to eliminate these contortions. All looked
great, but when I saved my work to a .pdb file and opened it back up,
it contained brok
I've got a Dell D820.
I tried but it didn't fix my problem...
I went for the soft solution first (partial removal of the "guilty"
software) and for the hard one (total removal) then.
The same error appears...as nothing changed.
A.
DeLano Scientific wrote:
Joris,
Some Dell systems are un
Just put it on the Wiki.
http://www.pymolwiki.org/index.php/Main_Page
Read the main page on how to register.
-- Jason
On Thursday 14 December 2006 11:33, pymol-users-requ...@lists.sourceforge.net
wrote:
> Subject: [PyMOL] A little plugin
> To: pymol-users@lists.sourceforge.net
> Message-ID: <7
Esben,
load molA.pdb
select selA, resi 100-200
create molAcpy, molA
select selAcpy, selA in molAcpy
Note that this will only work if the atom identifiers: name, resi, resn,
segi, chain are all unique. The "in" operator does not distinguish based on
the "alt" (alternate conformer) property, so al
Joris,
Some Dell systems are uniquely afflicted -- according to another Dell XP/SP2
owner:
"I found the solution, apparently the installer gets screwed up by some
software
that Dell installs as part of their standard build. The fix can be found
at:
http://www.wave.com/support/CSC/CustomerS
Dear all,
We installed yesterday six brand new Dell PCs with winXPpro/SP2 (fully
updated) and encounter exactly the same error (and also...the solutions
in the pymol wiki didn't help us so far). Anyone a solution?
Thanks in advance.
Best,
Joris Beld
Hilvert Group, ETH Zürich
Angelo D Favia wrote:
Hi All
in one of my scripts I have a problem with getting a selection for a new
molecule which is created from a copy of another which also have a selection.
In the first one a selection is made of the user, but after creating a new
molecule from the whole of the old, I cannot use the old se
Hi Andrew,
regarding hydrophobicity coloring, we use the rTools from Kristian Rother.
http://www.rubor.de/bioinf/pymol_extensions.html
The coloring schemes are according to
http://www.expasy.org/cgi-bin/protscale.pl
It comes with a nice user interface, or on command prompt you would
simply do som
