Re: [PyMOL] mutagenesis

2007-05-01 Thread Noinaj
Madhavi, Not sure if anyone has replied to your post. i think there are at least two ways to scan the available rotamers (at least with Windows XP). Once you have made the mutation... 1- use the arrow keys to change rotamers 2- use the forward (>) and back (<) arrows on the frame selection

[PyMOL] mutagenesis

2007-05-01 Thread Nalam, Madhavi
Hello: I am trying to mutate ALA to VAL in PyMOL. I would like to see possible rotamers for Val. Is it possible to do this in PyMOL? I am using mutagenesis option in PyMOL. Once I select the Val residue, it asks to select a conformational state. I assume this is for various rotamers. But how do I c

[PyMOL] Multithreading support

2007-05-01 Thread Andrew Ryzhkov
Hello! I found that the pyMol can't properly detects number of processors if there are more than 9 processors in the system just because of "ncpu=int(l[0][0])" line in the "__init__.py" file. It should be changed to "ncpu=int(l[0])". Anyway, even after that the pyMol can utilize only up to 12 pro