[PyMOL] cmd.rotate in Pymol 1.0

2007-08-01 Thread Buz Barstow
Dear All, I'm trying to rotate an object about an axis about that runs through it using the cmd.rotate command in Pymol 1.0, and am getting unexpected results. Here's the command that I'm using; cmd.rotate(axis=e1Axis, origin=eCenter, selection='cro_0001_2',angle=45.0) I've attached tw

[PyMOL] Command-line arguments when using PyMOL to launch a script

2007-08-01 Thread Michael Lerner
Hi, I have a script that uses PyMOL to aid with a lot of calculations. So, I run the script like this: pymol -c script.py The script has grown so that it has a lot of options. Right now, I edit the script every time I want to change them. If it were a normal Python script, I'd run it like scrip