Thanks Warren and Tsjerk for your hints. This will keep me busy for a while playing with options.
Andy Andrew D. Fant wrote: > Is there an easy way to refer to/select a portion of a molecular > surface that is within a given distance of another molecule's surface? > I'm trying to generate some graphics for a presentation on a signaling > pathway, and I want to show just the part of each peptide's solvent > accessible surface that is making contact with the binding site. > Ideally, I would like to be able to color this, at least in a > contrasting color to the structures of the components, but preferably > tied to electrostatic potential or hydrophobicity. Has anyone ever > done this, and if so, can you spare any advice?
