Re: [PyMOL] PyMol initialization

2008-10-04 Thread David Hall
Put the commands in your pymolrc file See http://pymolwiki.org/index.php/Launching_PyMOL#Windows -David Hall - Original Message > From: Kelvin Luther > To: pymol-users@lists.sourceforge.net > Sent: Saturday, October 4, 2008 5:53:24 PM > Subject: [PyMOL] PyMol initialization > > Hello

[PyMOL] PyMol initialization

2008-10-04 Thread Kelvin Luther
Hello, I'm running PyMol 0.98 on windows, and I'm hoping someone can tell me how to change the default values for various settings on startup. For example, I would like a white background, maximum performance, use most memory for rendering etc. These are all typically things I have to change

Re: [PyMOL] Sequence alignment and Structure alignment

2008-10-04 Thread Thomas Juettemann
You can save the "alignment" object resulting from an align command to an aln file: align sele1, sele2, object=aln_obj save alignment.aln, aln_obj Cheers. Thomas On Sun, Sep 28, 2008 at 21:14, Praveen Madala wrote: > Hi, > Can I able to save sequence alignment got .. after performing the >