Dear all,
after upgrading xquartz to the latest version (2.3.2, then 2.3.2.1), I
am left with unusable pymol (installed via fink, pymol-py25 1.1r2-1001).
When rotating objects the screen flickers like a disco strobe.
Unfortunately, xquartz doesn't come with an obvious uninstaller. When I
r
I am looking at a structure that contains selenomethionine (rendered MSE
in the sequence). When I Show Surface, Se-Met is not displayed with a
surface, but all the other residues are. Is there any way to make a
surface over Se-Met as well?
Scott
---
Scott Le
Scott,
the MSEs are probably HETATM records instead of ATOM records. You can either
replace the HETATM records to ATOM records or set surface_mode to 1 which
allows rendering of surfaces with HETATM records (I think, am a bit fuzzy on
that)
HTH
Carsten
-Original Message-
From
Howdy,
Under OS X 10.4, I can do this:
[b...@flange][/nfs/home/bene]
/programs/i386-mac/pymol/1.1r1/PyMOLX11Hybrid.app/Contents/MacOS/MacPyMOL -qc
[b...@flange][/nfs/home/bene] echo $?
0
But on 10.5, I get this:
[b...@macintel27][/nfs/home/bene]
/programs/i386-mac/pymol/1.1r1/PyMOLX11Hybrid.