Hi all I am working with a multidomain protein. which is present in closed and open conforamtion because of the motion in the domains of the protein. I would like to describe the roation angle of the different domains of the protein and the direction of the domain motion of my structure as a pictorial representation. I know the rotation angles and the direction of motion. My major problem is the represtion in picture with arrows and shaft with the cartoon diagram. I donot know which program can do this. Is it this can be done with pymol? I know that Dyndom can do everything, but here again i am not aware with the represetion of the domain motion with arrows and shaft. i would appreciate the suggestions.
Thanks in advance Peter
