[PyMOL] XML-RPC --> master/slave(s) pymol sessions

2009-06-04 Thread Lesburg, Charles
Hi PyMOLers, >From time to time, I find myself sharing structures using PyMOL with coworkers/collaborators at remote locations. I have used various screen-sharing tools (e.g. VNC) to do this. If you've ever done this, even over a fast 'net connection, you know that the quality suffers significan

Re: [PyMOL] XML-RPC --> master/slave(s) pymol sessions

2009-06-04 Thread Shivender Shandilya
FWIW, perhaps now would be a good a time to start looking at integrating Verse into PyMOL: http://en.wikipedia.org/wiki/Verse_protocol Blender, an open-source graphics program (and a free alternative to Maya), uses it quite well. Just as an aside, improved PyMOL and Blender integration would be s

Re: [PyMOL] get color function?

2009-06-04 Thread Matthew O'Meara
Thanks Peter, In case others care, this is what I came up with: def get_residue_colors( sele ): pymol.stored.colors = [] cmd.iterate( sele, "stored.colors.append( (chain, resi, name, color))") res_colors = {} for chain, resi, name, color in pymol.stored.colors: if name ==

[PyMOL] unable to select

2009-06-04 Thread Matthew O'Meara
Hi, In a wizard I am working on when I open the sequence viewer I cannot make selections by clicking on the residues, other means of making selections such as clicking directly on the residue and using 'sele' from the command line work. Unfortunately I cannot give a simple test case because I have

Re: [PyMOL] XML-RPC --> master/slave(s) pymol sessions

2009-06-04 Thread Greg Landrum
Dear all, As the author of the un(der)document pymol xml-rpc stuff, I will pipe up with what info I can provide. On Thu, Jun 4, 2009 at 1:32 PM, Lesburg, Charles wrote: > > >From time to time, I find myself sharing structures using PyMOL with > coworkers/collaborators at remote locations.  I hav

Re: [PyMOL] get color function?

2009-06-04 Thread Tsjerk Wassenaar
Hi Matthew, Why don't you use: cmd.iterate( sele + " and n. ca", ... to avoid doing a lot of work for nothing... (you may want to check whether a selection is given to avoid an error though) Cheers, Tsjerk On Thu, Jun 4, 2009 at 5:37 PM, Matthew O'Meara wrote: > Thanks Peter, > In case other