[PyMOL] Selecting ASP and GLU

2011-03-01 Thread Martin Hediger
Dear all What is the selection syntax to select all GLU and ASP residues within an object? I'm trying it the way its written on the wiki: remove resn hoh# remove water h_add # add hydrogens as surface color grey90 color slate, resn lys # lysines in light blue color pal

Re: [PyMOL] Selecting ASP and GLU

2011-03-01 Thread Tsjerk Wassenaar
Hi Martin, The wiki way should work. The only thing I can think of is that you're not doing what you think you're doing :S Did you copy paste the commands from the wiki? Did you get an error? What version are you using? > but, the selection kind of does not work for me (I'm assuming the operator

Re: [PyMOL] Selecting ASP and GLU

2011-03-01 Thread David Rodríguez
Hi Martin, Try the following: color tv_red, resn asp+glu or color tv_red, resn asp or resn glu Cheers, 2011/3/1 Martin Hediger > Dear all > What is the selection syntax to select all GLU and ASP residues within an > object? > > I'm trying it the way its written on the wiki: > > remove resn h

Re: [PyMOL] Selecting ASP and GLU

2011-03-01 Thread Sampson, Jared
Hi Martin - ** Short answer: Use `resn asp+glu` (although your original command actually works for me). ** Not-so-short answer, with a bonus question about comment syntax: The Asp/Glu line of your script can be condensed slightly using a plus sign, but the original syntax of that line actually

Re: [PyMOL] Selecting ASP and GLU

2011-03-01 Thread Jason Vertrees
Hi Martin, To select all ASPs and GLUs just type, select resn GLU+ASP or select resn GLU or resn ASP or, if you need parentheses, select ((resn GLU) or (resn ASP)) Maybe this will help: # fetch a test protein fetch 1rsy, async=0 # color all ASPs and GLUs red color tv_red, (resn ASP or r

Re: [PyMOL] Selecting ASP and GLU

2011-03-01 Thread Robert Campbell
Hi Martin, On Tue, 01 Mar 2011 13:44:36 +0100 Martin Hediger wrote: > Dear all > What is the selection syntax to select all GLU and ASP residues within > an object? > > I'm trying it the way its written on the wiki: > > remove resn hoh# remove water > h_add # add hydrogens >