Hi Spyros,
In cases like these, I think it's usually best to use colours for the
selections and for the overlap:
color cyan, selection1
color yellow, selection2
color hotpink, selection1 and selection2
Hope it helps,
Tsjerk
On Tue, Jul 12, 2011 at 1:14 AM, Spyros Charonis s.charo...@gmail.com
Hi Spyros,
Creating selections the default way places pixel-size pink dots on
the structure, so I was wondering if there is some way to control
this for more complex visualization tasks?
set active_selections, off
set auto_show_selections, off
both seem to hide the pixels, but I'm not sure
Hi Spyros,
Because I wish to determine if I can
correlate the database motifs with ligand-binding residues, what I would
like is some way of superimposing (if possible) one selection onto the
other. I would color-code the selections (if possible, again) so that I
could see if one was on top
Hi Spyros,
Thank you for the links, this documentation is helpful! I am not actually
creating alignments, I just choose the Display = Sequence option from the
external GUI menu to get the protein sequence of my PDB structure. I was
meaning to ask - for a couple of PDB structures when PyMOL
Dear PyMOLers,
I should say that this isn't a PyMOL-specific question, for that I apologize
but I imagine several users on this mailing list will have experience
in sequence/structure analysis, that is the reason for posting it. I am
using a database that stores motifs sequences describing
