Re: [PyMOL] euler-rod axis

2011-07-24 Thread Thomas Holder
Hi jpd, > from the get_object_matrix output, > i can use the euler-rodrigues transformation > http://en.wikipedia.org/wiki/Euler%E2%80%93Rodrigues_formula > and get the axis and angle of rotation. > > is there a way to place the axis? if I understand you correct, you are looking for the translat

Re: [PyMOL] save new coordinate

2011-07-24 Thread Thomas Holder
Hi lina, lina wrote, On 07/22/11 12:55: > Thanks very much for your advice, but I don't know which part is wrong, > the new saved one is not the ideal one I wanted, which was supposed to > be the one I saw from screen. > > do I need to modify the transfrom_by_camera_rotation scrips a bit. > actua

Re: [PyMOL] save new coordinate

2011-07-24 Thread lina
On Mon, Jul 25, 2011 at 1:27 AM, Thomas Holder wrote: > Hi lina, > > lina wrote, On 07/22/11 12:55: >> >> Thanks very much for your advice, but I don't know which part is wrong, >> the new saved one is not the ideal one I wanted, which was supposed to >> be the one I saw from screen. >> >> do I ne