Re: [PyMOL] label_size in pymol 1.3 on Mac

2011-10-13 Thread lina
On Wed, Oct 12, 2011 at 5:04 AM, Peter D Simone wrote: > I'm having this same problem with PyMOL 1.4.1. Ray tracing doesn't make > any difference. Changing label_font_id also seems to not affect anything, > normal or ray traced. They both work on PyMOL 0.99 on Windows. > Hmm... FYI: The PyMOL

[PyMOL] get_viewport

2011-10-13 Thread Jason Vertrees
Greetings, A while ago the ability to easily get the viewport dimensions was removed. In the open-source revision 3971 (just committed) it's been restored. Cheers, -- Jason -- Jason Vertrees, PhD PyMOL Product Manager Schrodinger, LLC (e) jason.vertr...@schrodinger.com (o) +1 (603) 374-7120

Re: [PyMOL] PQR Display in PyMOL

2011-10-13 Thread Tsjerk Wassenaar
Hi Martin, I think that Pymol indeed assumes PDB formatting, where the b-factor and occupancy fields are float format %6.2f, whereas the PQR format often uses %8.3f formatting in stead. That will make both approaches fail. You'll have to do some scripting to get it right: You can try the followin