While the single acceptor H-bond is most common, bifurcated (or three-centred)
H-bods are
not uncommon in crystal structures, as described starting page 22 of GA
Jeffrey's book:
http://www.amazon.com/Introduction-Hydrogen-Bonding-Physical-Chemistry/dp/0195095499/ref=sr_1_2?ie=UTF8&qid=1322331503
Thomas, thank you for so detailed explanation.
This way works good but I'd like to ask you about possibe Hbonds in the
protein chain.
As I remember for protein physics courses the H atom is always donor for
only ONE H-bond ( and O or N atoms could be akceptors for 1 or 2 Hbonds)
But In my case t
Dear all! :)
I need to merge two chains in one pdb ( object) into one united chain. How
I could do it?
Thanks
James
2011/11/18 Joel Tyndall
> James,
>
> ** **
>
> Please post this to the bulletin board. You can try to click on the word
> (residues usually default) at the bottom right of
Hi All,
I would like to have sterioscopic 3D support under linux. I know this can
be done with a nvidia Quadro card, as shown on your supported platform page:
http://pymol.org/support/platforms
I have found that the HD6800 series from AMD has support for sterioscopic
3D and Quad Buffered OpenGL.
Hi James,
> As I've understood there are no posible ways to represent H-bonds in
> proteins in explicit manner. So I'm looking for possible way to do it
> via some plugin or another way.
PyMOL can find polar contacts and represent them as dashed lines. You
don't need any extra plugin.
http://py
