Re: [PyMOL] Is there a simple way to script in pymol?

Hi. I'm sorry I didn't respond earlier. I wasn't well. Thank you for all of your replays. Jeff Van Voorst's solution was the one I was looking for. Again. Thank and sorry Yotam On Mon, Jun 18, 2012 at 6:00 PM, Jeffrey Van Voorst wrote: > Hello Yotam, > > You can place the commands you would o

[PyMOL] ed maps

hi, i think i am missing something simple. i open my pdb files, then auto open an mtz file which draws the map far away from my pdb. how do i center and redraw the map ? is there a gui way or should i isomesh etc ? thanks jpd -

Re: [PyMOL] PyMOL MOPAC format

Hi Martin, I don't know the MOPAC format and couldn't find a specification ad hoc. But the attached script will produce output which is equivalent to your example. Use the "zero" argument to specify the selection of "+0" flagged atoms. Cheers, Thomas On 06/21/2012 11:27 PM, Martin Hediger