[PyMOL] Saving setting in PyMol

Dear PyMol users! I wounder to know about possible way to save settings of the PyMol after LogOut from it. E.g I've defined some basic settings like fetch_host and fetch_patch for uploading of new pdb files as well as set new background colour. Also I've changed some advanced settings - e.g I

Re: [PyMOL] Saving setting in PyMol

Hi James Check out the information about how to load custom settings and functions: http://www.pymolwiki.org/index.php/Pymolrc Hope this helps, Folmer 2012/8/16 James Starlight jmsstarli...@gmail.com: Dear PyMol users! I wounder to know about possible way to save settings of the PyMol

[PyMOL] mapping atom names between molecules

I too have encountered a similar problem and was hoping that somebody had a suggestion for this. I've tried using CEALIGN to attempt to align the molecules and then hoped that I could simply use some atom-atom pairwise distances to map one set of atoms onto another but CEALIGN doesn't seem to