Re: [PyMOL] Increase sphere size for heavy element

2013-02-26 Thread Thomas Holder
Hi Martin, PyMOL alter elem W, vdw=2.0 PyMOL rebuild Cheers, Thomas Martin Hediger wrote, On 02/26/13 08:38: Hi PyMOL users If I display these coordinates HETATM 38 C LIG 2 1.535 2.288 -4.156 1.00 0.00 C HETATM 39 C LIG 2 2.284 1.535

Re: [PyMOL] Display style for partial bond

2013-02-26 Thread Thomas Holder
Hi Martin, only distance measures can draw dashed lines in PyMOL, so try this: unbond elem W, elem C show sticks show sphere, elem W distance transbonds, elem W, elem C hide label set dash_round_ends, off set dash_radius, 0.2 set dash_length, 0.4 set dash_gap, 0.15 ray The dashes will display

Re: [PyMOL] How to display .mtz files and work with them

2013-02-26 Thread Joel Tyndall
Hi Matthias, I can at least try and answer some of your questions: 1. You can simply click on the command button (rhs side grey window... Command Builder Volume) to get back to the command info you want. Alternatively type in your commands into the viewer window and use escape to see