[PyMOL] Special word to select ligand?

2014-08-19 Thread Markus Heller
Hi, I'm wondering if the following exists: a special word to select the ligand. The expression "organic" will select all organic molecules *including* buffer and other molecules that are artifacts from crystallization. Is there a way (surely there must be, so I'd better say has somebody done

Re: [PyMOL] option pdb_conect_nodup unavailable in OpenSource version 1.7

2014-08-19 Thread Hongbo Zhu 朱宏博
Hi, Thomas, thanks for checking that and responding quickly. I also found out the meaning of the option myself. At the moment, I write some post-processing scripts to cope with that issue. best, Hongbo On Tue, Aug 19, 2014 at 4:05 PM, Thomas Holder < thomas.hol...@schrodinger.com> wrote: > Hi

Re: [PyMOL] option pdb_conect_nodup unavailable in OpenSource version 1.7

2014-08-19 Thread Thomas Holder
Hi Hongbo, you are right that the website and the implementation don't match, thanks for pointing that out. This was a feature request from a paying PyMOL sponsor, which often means that we put the feature only (or first) in Incentive PyMOL. But thinking about it, this is a rather small change