Hi,
How can I best determine the distance between matching pairs of atoms in two or
more aligned structures? Fairly easy to do when the two aligned structures are
the same, but how does one go about when the structures are not the same? The
problem is that I cannot figure out how to dependably
Dear Gabriel,
You should try something like this
sele ligand, not polymer and resn leu
notice that "ligand" is just a variable name it has no special meaning if
you do
sele asdf, not polymer and resn leu
You will get the same result. The selection is defined by the portion after
the coma.
Dear Pymol users,
I have loaded in the protein LeuT, a leucine transporter, but am unable to
select and show the substrate leucine.
When using the command sele ligand, resn LEU , all the leucines of the protein
are highlighted instead of the main leucine substrate molecule.
?I am entirely stump
